miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>28612_hsa-mir-373:mirbase
          Length = 69

 Score =  121 bits (61), Expect = 6e-29
 Identities = 67/69 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  gggatactcaaaatgggggcgctttcctttttgtccgtactgggaagtgctccgattttg 60
          ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 1  gggatactcaaaatgggggcgctttcctttttgtctgtactgggaagtgcttcgattttg 60

                   
Query: 61 gggtgtccc 69
          |||||||||
Sbjct: 61 gggtgtccc 69




>30977_ppy-mir-373:mirbase
          Length = 69

 Score =  113 bits (57), Expect = 2e-26
 Identities = 66/69 (95%)
 Strand = Plus / Plus

                                                                      
Query: 1  gggatactcaaaatgggggcgctttcctttttgtccgtactgggaagtgctccgattttg 60
          |||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||
Sbjct: 1  gggatactcaaaatgggggcgctttcctttttctctgtactgggaagtgcttcgattttg 60

                   
Query: 61 gggtgtccc 69
          |||||||||
Sbjct: 61 gggtgtccc 69




>27875_mml-mir-373:mirbase
          Length = 69

 Score = 81.8 bits (41), Expect = 6e-17
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                      
Query: 1  gggatactcaaaatgggggcgctttcctttttgtccgtactgggaagtgctccgattttg 60
          ||||||| ||||||||| || |||||| ||||||| || |||||||||||| ||||||||
Sbjct: 1  gggatacccaaaatgggagcactttcccttttgtctgtgctgggaagtgcttcgattttg 60

                   
Query: 61 gggtgtccc 69
          |||||||||
Sbjct: 61 gggtgtccc 69