miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28640_hsa-mir-410:mirbase
Length = 80
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 gtacctgagaagaggttgtctgtgatgagttcgcttttattaatgacgaatataacacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtacctgagaagaggttgtctgtgatgagttcgcttttattaatgacgaatataacacag 61
Query: 61 atggcctgttttcagtacc 79
|||||||||||||||||||
Sbjct: 62 atggcctgttttcagtacc 80
>30994_ppy-mir-410:mirbase
Length = 80
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 gtacctgagaagaggttgtctgtgatgagttcgcttttattaatgacgaatataacacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtacctgagaagaggttgtctgtgatgagttcgcttttattaatgacgaatataacacag 61
Query: 61 atggcctgttttcagtacc 79
|||||||||||||||||||
Sbjct: 62 atggcctgttttcagtacc 80
>27893_mml-mir-410:mirbase
Length = 80
Score = 149 bits (75), Expect = 3e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 1 gtacctgagaagaggttgtctgtgatgagttcgcttttattaatgacgaatataacacag 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtacctgaggagaggttgtctgtgatgagttcgcttttattaatgacgaatataacacag 61
Query: 61 atggcctgttttcagtacc 79
|||||||||||||||||||
Sbjct: 62 atggcctgttttcagtacc 80
>33363_bta-mir-410:mirbase
Length = 81
Score = 125 bits (63), Expect = 5e-30
Identities = 76/79 (96%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 1 gtacctgagaagaggttgtctgtgatgagttcgcttttattaatgacgaatataacacag 60
|||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3 gtacttgaggagaggttgtctgtgatgagttcgcttt-attaatgacgaatataacacag 61
Query: 61 atggcctgttttcagtacc 79
|||||||||||||||||||
Sbjct: 62 atggcctgttttcagtacc 80
>33838_oar-mir-410:mirbase
Length = 126
Score = 125 bits (63), Expect = 5e-30
Identities = 76/79 (96%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 1 gtacctgagaagaggttgtctgtgatgagttcgcttttattaatgacgaatataacacag 60
|||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 34 gtacttgaggagaggttgtctgtgatgagttcgcttt-attaatgacgaatataacacag 92
Query: 61 atggcctgttttcagtacc 79
|||||||||||||||||||
Sbjct: 93 atggcctgttttcagtacc 111
>33839_oar-mir-410:mirbase
Length = 126
Score = 125 bits (63), Expect = 5e-30
Identities = 76/79 (96%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 1 gtacctgagaagaggttgtctgtgatgagttcgcttttattaatgacgaatataacacag 60
|||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 34 gtacttgaggagaggttgtctgtgatgagttcgcttt-attaatgacgaatataacacag 92
Query: 61 atggcctgttttcagtacc 79
|||||||||||||||||||
Sbjct: 93 atggcctgttttcagtacc 111
>32061_mmu-mir-410:mirbase
Length = 81
Score = 117 bits (59), Expect = 1e-27
Identities = 75/79 (94%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 1 gtacctgagaagaggttgtctgtgatgagttcgcttttattaatgacgaatataacacag 60
|||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3 gtacttgaggagaggttgtctgtgatgagttcgcttt-attaatgacgaatataacacag 61
Query: 61 atggcctgttttcagtacc 79
|||||||||||||| ||||
Sbjct: 62 atggcctgttttcaatacc 80
>27169_eca-mir-410:mirbase
Length = 74
Score = 115 bits (58), Expect = 5e-27
Identities = 71/74 (95%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 6 tgagaagaggttgtctgtgatgagttcgcttttattaatgacgaatataacacagatggc 65
|||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 tgaggagaggttgtctgtgatgagttcgcttt-attaatgacgaatataacacagatggc 59
Query: 66 ctgttttcagtacc 79
|||| |||||||||
Sbjct: 60 ctgtcttcagtacc 73
>32904_rno-mir-410:mirbase
Length = 76
Score = 115 bits (58), Expect = 5e-27
Identities = 71/74 (95%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 6 tgagaagaggttgtctgtgatgagttcgcttttattaatgacgaatataacacagatggc 65
|||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4 tgaggagaggttgtctgtgatgagttcgcttt-attaatgacgaatataacacagatggc 62
Query: 66 ctgttttcagtacc 79
||||||||| ||||
Sbjct: 63 ctgttttcaatacc 76
>26837_cfa-mir-410:mirbase
Length = 56
Score = 89.7 bits (45), Expect = 3e-19
Identities = 55/57 (96%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 13 aggttgtctgtgatgagttcgcttttattaatgacgaatataacacagatggcctgt 69
||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 1 aggttgtctgtgatgagttcgcttt-attaatgccgaatataacacagatggcctgt 56
