miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF01059;mir-598;AACY023053320.1/272-367 408172:marine metagenome
          Length = 96

 Score = 42.1 bits (21), Expect = 0.001
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 46 catagtcatcatcatcatcat 66
          |||||||||||||||||||||
Sbjct: 62 catagtcatcatcatcatcat 42




>RF01059;mir-598;AASC02036540.1/4989-5084 6500:Aplysia californica
          (California sea hare)
          Length = 96

 Score = 42.1 bits (21), Expect = 0.001
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 46 catagtcatcatcatcatcat 66
          |||||||||||||||||||||
Sbjct: 47 catagtcatcatcatcatcat 27




>RF01059;mir-598;ABRM01010261.1/938-1034 6085:Hydra magnipapillata
          Length = 97

 Score = 42.1 bits (21), Expect = 0.001
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 46 catagtcatcatcatcatcat 66
          |||||||||||||||||||||
Sbjct: 47 catagtcatcatcatcatcat 27




>RF01059;mir-598;ABRM01212193.1/250-345 6085:Hydra magnipapillata
          Length = 96

 Score = 42.1 bits (21), Expect = 0.001
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 46 catagtcatcatcatcatcat 66
          |||||||||||||||||||||
Sbjct: 53 catagtcatcatcatcatcat 33




>RF01059;mir-598;ABRM01196091.1/481-576 6085:Hydra magnipapillata
          Length = 96

 Score = 42.1 bits (21), Expect = 0.001
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 46 catagtcatcatcatcatcat 66
          |||||||||||||||||||||
Sbjct: 59 catagtcatcatcatcatcat 39




>RF01059;mir-598;ABRM01022256.1/6464-6372 6085:Hydra
          magnipapillata
          Length = 93

 Score = 42.1 bits (21), Expect = 0.001
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 46 catagtcatcatcatcatcat 66
          |||||||||||||||||||||
Sbjct: 65 catagtcatcatcatcatcat 85