miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00639;mir-515;AANU01181659.1/5786-5873 9544:Macaca mulatta
(rhesus monkey)
Length = 88
Score = 113 bits (57), Expect = 4e-25
Identities = 76/81 (93%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 5 gctgtgactctccagagggatgcactttctcttatgtg-aaaaaatagaaggcgcttccc 63
|||||||||||||||||||||||||||||| ||||||| |||||| ||||||||| ||||
Sbjct: 7 gctgtgactctccagagggatgcactttcttttatgtgaaaaaaaaagaaggcgcatccc 66
Query: 64 tttagagcgttacggtttggg 84
||| |||||||||||||||||
Sbjct: 67 tttggagcgttacggtttggg 87
>RF00639;mir-515;CABD01442931.2/227-141 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 87
Score = 60.0 bits (30), Expect = 5e-09
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 5 gctgtgactctccagagggatgcactttctcttatgtgaaaaaatagaaggcgcttccct 64
|||||||| ||| ||||||| ||||||||| || | ||||| || || ||||||||||
Sbjct: 7 gctgtgaccctctagagggaagcactttctgttgtctgaaagaaaccaaagcgcttccct 66
Query: 65 ttagagcgttacggtttg 82
|| |||||||||||||||
Sbjct: 67 ttggagcgttacggtttg 84
>RF00639;mir-515;EU086472.1/60297-60383 9509:Ateles geoffroyi
(black-handed spider monkey)
Length = 87
Score = 58.0 bits (29), Expect = 2e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 26 gcactttctcttatgtgaaaaaatagaaggcgcttccctttagagcgttacggtttg 82
||||||||| || | |||||||| |||||||||||||||| |||| ||||||||||
Sbjct: 28 gcactttctattgtctgaaaaaaaagaaggcgcttcccttgagagtcttacggtttg 84
>RF00639;mir-515;AANU01181659.1/6633-6719 9544:Macaca mulatta
(rhesus monkey)
Length = 87
Score = 56.0 bits (28), Expect = 7e-08
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 5 gctgtgactctccagagggatgcactttctcttatgtgaaaaaatagaaggcgcttccct 64
|||||||| ||| ||||||| ||||||||| || | || || || |||| ||||||||||
Sbjct: 7 gctgtgaccctctagagggaagcactttctgttgtctggaagaaaagaatgcgcttccct 66
Query: 65 ttagagcgttac 76
|||||| |||||
Sbjct: 67 ttagagggttac 78
>RF00639;mir-515;EU086472.1/40574-40660 9509:Ateles geoffroyi
(black-handed spider monkey)
Length = 87
Score = 52.0 bits (26), Expect = 1e-06
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 1 tcaagctgtgactctccagagggatgcactttctcttatgtgaaaaaatagaaggcgctt 60
|||||||||||| ||||||||| |||||||||| || | ||| || |||| | ||||
Sbjct: 3 tcaagctgtgacgttccagagggctgcactttctgttgtcaaaaagaaaagaaagtgctt 62
Query: 61 ccctttagagcgttacggtttg 82
|||||||||| || ||||||||
Sbjct: 63 ccctttagagtgtgacggtttg 84
>RF00639;mir-515;EU086470.1/69947-70033 61621:Rhinopithecus bieti
(Black snub-nosed monkey)
Length = 87
Score = 52.0 bits (26), Expect = 1e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 5 gctgtgactctccagagggatgcactttctcttatgtgaaaaaatagaaggcgcttccct 64
|||||||||||| ||||||| ||||||||| || ||||| || |||| |||||||| |
Sbjct: 7 gctgtgactctctagagggaagcactttctgttgcttgaaagaagagaaagcgcttcctt 66
Query: 65 ttagag 70
||||||
Sbjct: 67 ttagag 72
>RF00639;mir-515;AANU01181658.1/2015-2101 9544:Macaca mulatta
(rhesus monkey)
Length = 87
Score = 52.0 bits (26), Expect = 1e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 5 gctgtgactctccagagggatgcactttctcttatgtgaaaaaatagaaggcgcttccct 64
|||||||||||| |||||| || |||||| || | ||||| || | || ||||||| ||
Sbjct: 7 gctgtgactctctggagggaagcgctttctgttgtctgaaagaaaacaaagcgcttctct 66
Query: 65 ttagagcgttacggtttg 82
|||||| |||||||||||
Sbjct: 67 ttagagagttacggtttg 84
>RF00639;mir-515;AANU01181659.1/12136-12222 9544:Macaca mulatta
(rhesus monkey)
Length = 87
Score = 52.0 bits (26), Expect = 1e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 5 gctgtgactctccagagggatgcactttctcttatgtgaaaaaatagaaggcgcttccct 64
|||||||| ||||||||||| ||||||||| || | ||||| || || ||||| ||||
Sbjct: 7 gctgtgaccctccagagggaagcactttctgttgtctgaaagaaagcaaagcgctcccct 66
Query: 65 ttagagcgttacggtttg 82
|||||| ||||||||||
Sbjct: 67 ttagaggattacggtttg 84
>RF00639;mir-515;AANU01181659.1/8603-8689 9544:Macaca mulatta
(rhesus monkey)
Length = 87
Score = 52.0 bits (26), Expect = 1e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 5 gctgtgactctccagagggatgcactttctcttatgtgaaaaaatagaaggcgcttccct 64
|||||||| ||| ||||||| ||||||| |||| ||||||| | |||| ||||||||||
Sbjct: 7 gctgtgaccctctagagggaagcactttatcttgtgtgaaaggaaagaaagcgcttccct 66
Query: 65 ttagag 70
| ||||
Sbjct: 67 tcagag 72
>RF00639;mir-515;EU086472.1/56307-56393 9509:Ateles geoffroyi
(black-handed spider monkey)
Length = 87
Score = 50.1 bits (25), Expect = 4e-06
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 6 ctgtgactctccagagggatgcactttctcttatgtgaaaaaatagaaggcgcttccctt 65
||||||| ||| | ||||| ||||||||| | | |||||| || ||||| ||| ||||||
Sbjct: 8 ctgtgaccctctaaagggaagcactttctgtcaggtgaaagaaaagaagtcgcgtccctt 67
Query: 66 tagagcgttacggtttg 82
||||| ||||||||||
Sbjct: 68 tagaggtttacggtttg 84
>RF00639;mir-515;EU086472.1/50640-50726 9509:Ateles geoffroyi
(black-handed spider monkey)
Length = 87
Score = 48.1 bits (24), Expect = 2e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 27 cactttctcttatgtgaaaaaatagaaggcgcttccctttagagcgttacggtttg 82
|||||||| || ||||||| || |||| | |||||||||||||| ||||| |||||
Sbjct: 29 cactttctgttgtgtgaaagaagagaaagtgcttccctttagagagttactgtttg 84
>RF00639;mir-515;EU086471.1/93107-93193 9590:Symphalangus
syndactylus (siamang)
Length = 87
Score = 48.1 bits (24), Expect = 2e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 5 gctgtgactctccagagggatgcactttctcttatgtgaaaaaatagaaggcgcttccct 64
|||||||||||||| ||||| ||||||||| || | |||| || |||| || |||||||
Sbjct: 7 gctgtgactctccaaagggaagcactttctgttgtctgaaggaaaagaacgcacttccct 66
Query: 65 ttagagcgttac 76
| |||| |||||
Sbjct: 67 tcagagtgttac 78
>RF00639;mir-515;EU086472.1/58206-58292 9509:Ateles geoffroyi
(black-handed spider monkey)
Length = 87
Score = 46.1 bits (23), Expect = 7e-05
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 20 agggatgcactttctcttatgtgaaaaaatagaaggcgcttccctttagagcgttacggt 79
||||| ||| ||||| |||| ||||| || |||| ||||||||||||||| ||||| ||
Sbjct: 22 agggaagcattttctgttatttgaaagaaaagaactcgcttccctttagagtgttaccgt 81
Query: 80 ttg 82
|||
Sbjct: 82 ttg 84
>RF00639;mir-515;AANU01181657.1/1054-1140 9544:Macaca mulatta
(rhesus monkey)
Length = 87
Score = 44.1 bits (22), Expect = 3e-04
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 5 gctgtgactctccagagggatgcactttctcttatgtgaaaaaatagaaggcgcttccct 64
|||||||| || || ||| | |||||||||||| | | ||| || |||||| ||||||||
Sbjct: 7 gctgtgaccctacaaaggcaagcactttctcttgtctaaaagaaaagaaggtgcttccct 66
Query: 65 ttagagcgttacggtttg 82
|| || |||||||||||
Sbjct: 67 ttgcagtgttacggtttg 84
