miRNEST 2.0, an integrative microRNA resource :: BLAST
>27989_mml-mir-539:mirbase
Length = 78
Score = 153 bits (77), Expect = 2e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctttatttatgatgaatcatacaaggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tacttgaggagaaattatccttggtgtgttcgctttatttatgatgaatcatacaaggac 61
Query: 61 aatttctttttgagtat 77
|||||||||||||||||
Sbjct: 62 aatttctttttgagtat 78
>28787_hsa-mir-539:mirbase
Length = 78
Score = 153 bits (77), Expect = 2e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctttatttatgatgaatcatacaaggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tacttgaggagaaattatccttggtgtgttcgctttatttatgatgaatcatacaaggac 61
Query: 61 aatttctttttgagtat 77
|||||||||||||||||
Sbjct: 62 aatttctttttgagtat 78
>31126_ppy-mir-539:mirbase
Length = 78
Score = 153 bits (77), Expect = 2e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctttatttatgatgaatcatacaaggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tacttgaggagaaattatccttggtgtgttcgctttatttatgatgaatcatacaaggac 61
Query: 61 aatttctttttgagtat 77
|||||||||||||||||
Sbjct: 62 aatttctttttgagtat 78
>27225_eca-mir-539:mirbase
Length = 78
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctttatttatgatgaatcatacaaggac 60
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 2 tacttgaggagaaattatccttgctgtgttcgctttatttgtgatgaatcatacaaggac 61
Query: 61 aatttctttttgagtat 77
|||||||||||||||||
Sbjct: 62 aatttctttttgagtat 78
>33411_bta-mir-539:mirbase
Length = 78
Score = 129 bits (65), Expect = 3e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctttatttatgatgaatcatacaaggac 60
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2 tacttgaggagaaattatccttggtgtgttcgctttatttgggatgaatcatacaaggac 61
Query: 61 aatttctttttgagtat 77
||||||||| |||||||
Sbjct: 62 aatttctttctgagtat 78
>33864_oar-mir-539:mirbase
Length = 110
Score = 129 bits (65), Expect = 3e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctttatttatgatgaatcatacaaggac 60
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 16 tacttgaggagaaattatccttggtgtgttcactttatttgggatgaatcatacaaggac 75
Query: 61 aatttctttttgagtat 77
|||||||||||||||||
Sbjct: 76 aatttctttttgagtat 92
>33865_oar-mir-539:mirbase
Length = 110
Score = 129 bits (65), Expect = 3e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctttatttatgatgaatcatacaaggac 60
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 16 tacttgaggagaaattatccttggtgtgttcactttatttgggatgaatcatacaaggac 75
Query: 61 aatttctttttgagtat 77
|||||||||||||||||
Sbjct: 76 aatttctttttgagtat 92
>26875_cfa-mir-539:mirbase
Length = 76
Score = 119 bits (60), Expect = 3e-28
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctttatttatgatgaatcatacaaggac 60
|||||||||||||||||||||||||||||||||| | ||| ||| |||||||||||||||
Sbjct: 1 tacttgaggagaaattatccttggtgtgttcgctgtgtttgtgaggaatcatacaaggac 60
Query: 61 aatttctttttgagta 76
||||||||||||||||
Sbjct: 61 aatttctttttgagta 76
>32201_mmu-mir-539:mirbase
Length = 74
Score = 89.7 bits (45), Expect = 3e-19
Identities = 69/76 (90%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctttatttatgatgaatcatacaaggac 60
|||||||||||||||||||||||||||||| || | ||| |||||||||||||||||
Sbjct: 1 tacttgaggagaaattatccttggtgtgttggc--tcttttggatgaatcatacaaggat 58
Query: 61 aatttctttttgagta 76
||||||||||||||||
Sbjct: 59 aatttctttttgagta 74
>32202_mmu-mir-539:mirbase
Length = 74
Score = 89.7 bits (45), Expect = 3e-19
Identities = 69/76 (90%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctttatttatgatgaatcatacaaggac 60
|||||||||||||||||||||||||||||| || | ||| |||||||||||||||||
Sbjct: 1 tacttgaggagaaattatccttggtgtgttggc--tcttttggatgaatcatacaaggat 58
Query: 61 aatttctttttgagta 76
||||||||||||||||
Sbjct: 59 aatttctttttgagta 74
>32949_rno-mir-539:mirbase
Length = 76
Score = 75.8 bits (38), Expect = 4e-15
Identities = 68/77 (88%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctttatttatgatgaatcatacaaggac 60
|||||||||||||||||||||||||||||| || | ||| ||||||||||||||||
Sbjct: 2 tacttgaggagaaattatccttggtgtgtttgc--tcttttggatgaatcatacaagggt 59
Query: 61 aatttctttttgagtat 77
|||||||||| ||||||
Sbjct: 60 aatttcttttcgagtat 76
>33070_rno-mir-3576:mirbase
Length = 115
Score = 75.8 bits (38), Expect = 4e-15
Identities = 68/77 (88%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctttatttatgatgaatcatacaaggac 60
|||||||||||||||||||||||||||||| || | ||| ||||||||||||||||
Sbjct: 94 tacttgaggagaaattatccttggtgtgtttgc--tcttttggatgaatcatacaagggt 37
Query: 61 aatttctttttgagtat 77
|||||||||| ||||||
Sbjct: 36 aatttcttttcgagtat 20
>28675_hsa-mir-487a:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 1e-08
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 15 ttatccttggtgtgttcgctttatttatgatgaatcatacaaggaca 61
|||||| || ||||||||||| |||||||| |||||||||| |||||
Sbjct: 17 ttatccctgctgtgttcgcttaatttatgacgaatcatacagggaca 63
>31023_ppy-mir-487a:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 1e-08
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 15 ttatccttggtgtgttcgctttatttatgatgaatcatacaaggaca 61
|||||| || ||||||||||| |||||||| |||||||||| |||||
Sbjct: 17 ttatccctgctgtgttcgcttaatttatgacgaatcatacagggaca 63
>27924_mml-mir-487a:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 25 tgtgttcgctttatttatgatgaatcatacaaggaca 61
|||||||||||| ||||||| |||||||||| |||||
Sbjct: 27 tgtgttcgctttgtttatgacgaatcatacagggaca 63
>26828_cfa-mir-377:mirbase
Length = 69
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 19 ccttggtgtgttcgctttatttatgatgaatcatacaa 56
|||||||| ||||||||||||||| ||||||| ||||
Sbjct: 16 ccttggtgaattcgctttatttatgttgaatcacacaa 53
>27159_eca-mir-377:mirbase
Length = 69
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 19 ccttggtgtgttcgctttatttatgatgaatcatacaa 56
|||||||| ||||||||||||||| ||||||| ||||
Sbjct: 16 ccttggtgaattcgctttatttatgttgaatcacacaa 53
>27883_mml-mir-377:mirbase
Length = 69
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 19 ccttggtgtgttcgctttatttatgatgaatcatacaa 56
|||||||| ||||||||||||||| ||||||| ||||
Sbjct: 16 ccttggtgaattcgctttatttatgttgaatcacacaa 53
>28621_hsa-mir-377:mirbase
Length = 69
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 19 ccttggtgtgttcgctttatttatgatgaatcatacaa 56
|||||||| ||||||||||||||| ||||||| ||||
Sbjct: 16 ccttggtgaattcgctttatttatgttgaatcacacaa 53
>30357_ptr-mir-377:mirbase
Length = 68
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 19 ccttggtgtgttcgctttatttatgatgaatcatacaa 56
|||||||| ||||||||||||||| ||||||| ||||
Sbjct: 15 ccttggtgaattcgctttatttatgttgaatcacacaa 52
>30984_ppy-mir-377:mirbase
Length = 69
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 19 ccttggtgtgttcgctttatttatgatgaatcatacaa 56
|||||||| ||||||||||||||| ||||||| ||||
Sbjct: 16 ccttggtgaattcgctttatttatgttgaatcacacaa 53
>33352_bta-mir-377:mirbase
Length = 69
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 19 ccttggtgtgttcgctttatttatgatgaatcatacaa 56
|||||||| ||||||||||||||| ||||||| ||||
Sbjct: 16 ccttggtgaattcgctttatttatgttgaatcacacaa 53
>33399_bta-mir-494:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 5e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 15 ttatccttggtgtgttcgctttatttatgatgaatcataca 55
|||||| || ||| ||| |||||||||||||||| ||||||
Sbjct: 20 ttatccgtgttgtcttctctttatttatgatgaaacataca 60
>33826_oar-mir-377:mirbase
Length = 131
Score = 42.1 bits (21), Expect = 5e-05
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 29 ttcgctttatttatgatgaatcatacaaggacaatttctttttgagtat 77
||||||||||||||| ||||||| |||| | ||| || | |||||||||
Sbjct: 67 ttcgctttatttatgttgaatcacacaaaggcaacttttgtttgagtat 115
>33827_oar-mir-377:mirbase
Length = 131
Score = 42.1 bits (21), Expect = 5e-05
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 29 ttcgctttatttatgatgaatcatacaaggacaatttctttttgagtat 77
||||||||||||||| ||||||| |||| | ||| || | |||||||||
Sbjct: 67 ttcgctttatttatgttgaatcacacaaaggcaacttttgtttgagtat 115
>33858_oar-mir-494:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 5e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 15 ttatccttggtgtgttcgctttatttatgatgaatcataca 55
|||||| || ||| ||| |||||||||||||||| ||||||
Sbjct: 25 ttatccgtgttgtattctctttatttatgatgaaacataca 65
>33859_oar-mir-494:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 5e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 15 ttatccttggtgtgttcgctttatttatgatgaatcataca 55
|||||| || ||| ||| |||||||||||||||| ||||||
Sbjct: 25 ttatccgtgttgtattctctttatttatgatgaaacataca 65
>26863_cfa-mir-494:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 33 ctttatttatgatgaatcataca 55
|||||||||||||||| ||||||
Sbjct: 36 ctttatttatgatgaaacataca 58
>27204_eca-mir-494:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 33 ctttatttatgatgaatcataca 55
|||||||||||||||| ||||||
Sbjct: 36 ctttatttatgatgaaacataca 58
>27765_mml-mir-154:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 29 ttcgctttatttatgatgaatcataca 55
|||||||||||| ||| ||||||||||
Sbjct: 33 ttcgctttatttgtgacgaatcataca 59
>27934_mml-mir-494:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 33 ctttatttatgatgaatcataca 55
|||||||||||||||| ||||||
Sbjct: 36 ctttatttatgatgaaacataca 58
>28220_mne-mir-154:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 29 ttcgctttatttatgatgaatcataca 55
|||||||||||| ||| ||||||||||
Sbjct: 33 ttcgctttatttgtgacgaatcataca 59
>28312_ggo-mir-154:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 29 ttcgctttatttatgatgaatcataca 55
|||||||||||| ||| ||||||||||
Sbjct: 33 ttcgctttatttgtgacgaatcataca 59
>28481_hsa-mir-154:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 29 ttcgctttatttatgatgaatcataca 55
|||||||||||| ||| ||||||||||
Sbjct: 33 ttcgctttatttgtgacgaatcataca 59
>28685_hsa-mir-494:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 33 ctttatttatgatgaatcataca 55
|||||||||||||||| ||||||
Sbjct: 36 ctttatttatgatgaaacataca 58
>30101_ppa-mir-154:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 29 ttcgctttatttatgatgaatcataca 55
|||||||||||| ||| ||||||||||
Sbjct: 33 ttcgctttatttgtgacgaatcataca 59
>30249_ptr-mir-154:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 29 ttcgctttatttatgatgaatcataca 55
|||||||||||| ||| ||||||||||
Sbjct: 33 ttcgctttatttgtgacgaatcataca 59
>30397_ptr-mir-494:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 33 ctttatttatgatgaatcataca 55
|||||||||||||||| ||||||
Sbjct: 35 ctttatttatgatgaaacataca 57
>30863_ppy-mir-154:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 29 ttcgctttatttatgatgaatcataca 55
|||||||||||| ||| ||||||||||
Sbjct: 33 ttcgctttatttgtgacgaatcataca 59
>31033_ppy-mir-494:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 33 ctttatttatgatgaatcataca 55
|||||||||||||||| ||||||
Sbjct: 36 ctttatttatgatgaaacataca 58
>31285_ppy-mir-1197:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 22 tggtgtgttcgctttatttatga 44
|||||||| ||||||||||||||
Sbjct: 32 tggtgtgtacgctttatttatga 54
>32183_mmu-mir-494:mirbase
Length = 85
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 33 ctttatttatgatgaatcataca 55
|||||||||||||||| ||||||
Sbjct: 38 ctttatttatgatgaaacataca 60
>32392_mmu-mir-1197:mirbase
Length = 120
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 22 tggtgtgttcgctttatttatga 44
|||||||| ||||||||||||||
Sbjct: 55 tggtgtgtacgctttatttatga 77
>32936_rno-mir-494:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 33 ctttatttatgatgaatcataca 55
|||||||||||||||| ||||||
Sbjct: 37 ctttatttatgatgaaacataca 59
>33470_bta-mir-1197:mirbase
Length = 97
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 22 tggtgtgttcgctttatttatga 44
|||||||| ||||||||||||||
Sbjct: 31 tggtgtgtacgctttatttatga 53
>33886_oar-mir-1197:mirbase
Length = 129
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 22 tggtgtgttcgctttatttatga 44
|||||||| ||||||||||||||
Sbjct: 49 tggtgtgtacgctttatttatga 71
>33887_oar-mir-1197:mirbase
Length = 129
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 22 tggtgtgttcgctttatttatga 44
|||||||| ||||||||||||||
Sbjct: 49 tggtgtgtacgctttatttatga 71
