miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01061;mir-548;ABSL01068449.1/36486-36403 9606:Homo sapiens
(human)
Length = 84
Score = 67.9 bits (34), Expect = 2e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaagaacctcag 72
|||||||||| | ||||||||||||||||| || ||| ||| |||||||| | || ||
Sbjct: 82 ttaggttggcacgaaagtaattgcagtttttaccattacttttaatggcaaaagccacaa 23
Query: 73 ttgcttttgtgccaacctaata 94
|| |||||||||||||||||||
Sbjct: 22 ttacttttgtgccaacctaata 1
>RF01061;mir-548;AANU01123316.1/10409-10492 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 65.9 bits (33), Expect = 9e-11
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaagaacctcag 72
||||| ||| |||||||||||||||||||| ||| ||| ||||||||| || |||| |||
Sbjct: 82 ttaggctggtgcaaaagtaattgcagtttttgccattactttcaatgggaaaaaccacag 23
Query: 73 ttgcttttg 81
|| ||||||
Sbjct: 22 ttacttttg 14
>RF01061;mir-548;CABD01078688.1/32-114 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 83
Score = 63.9 bits (32), Expect = 3e-10
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaagaacctcag 72
||||||||| ||||||||||| |||||||| ||| ||||||||||| |||| ||| |
Sbjct: 81 ttaggttggtgcaaaagtaatcgcagtttt-gccattattttcaatrgcaaaaactgcga 23
Query: 73 ttgcttttgtgccaacctaata 94
|| |||||| ||||||||||||
Sbjct: 22 ttacttttgcgccaacctaata 1
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgcagtttt 42
||||||||||||||||||||| ||||||||
Sbjct: 3 ttaggttggcgcaaaagtaatcgcagtttt 32
>RF01061;mir-548;AANU01290519.1/8633-8716 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 61.9 bits (31), Expect = 1e-09
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaagaacctcag 72
||||||||| ||||||||||||| ||||| ||| ||| ||| |||||| | |||| |||
Sbjct: 3 ttaggttggtgcaaaagtaattgtggttttcgccattacttttaatggcgaaaaccgcag 62
Query: 73 ttgcttttgtgccaaccta 91
|| |||||||| |||||||
Sbjct: 63 ttacttttgtgtcaaccta 81
>RF01061;mir-548;AANU01235723.1/7676-7593 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 61.9 bits (31), Expect = 1e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaa 63
||||||||| ||||||||||||||| ||||||| ||| ||||||||||||
Sbjct: 82 ttaggttggtacaaaagtaattgcagctttggccattactttcaatggcaa 32
>RF01061;mir-548;AANU01283759.1/9595-9678 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 61.9 bits (31), Expect = 1e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 24 caaaagtaattgcagttttggcctttattttcaatggcaagaacctcagttgcttttgtg 83
||||||||||||||||||| ||| ||| ||| |||| ||| |||| || |||||||||
Sbjct: 71 caaaagtaattgcagtttttgccattacttttaatgacaaaaaccacaaatgcttttgta 12
Query: 84 ccaacctaata 94
|||||||||||
Sbjct: 11 ccaacctaata 1
>RF01061;mir-548;AADC01144176.1/293955-294038 9606:Homo sapiens
(human)
Length = 84
Score = 60.0 bits (30), Expect = 5e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 24 caaaagtaattgcagttttggcctttattttcaatggcaagaacctcagttgcttttgtg 83
|||||||| |||| ||||| ||| ||| ||||||||||||||||| || || ||||||
Sbjct: 71 caaaagtagttgcggtttttgccgttactttcaatggcaagaaccgcaattacttttgca 12
Query: 84 ccaacctaat 93
||||||||||
Sbjct: 11 ccaacctaat 2
>RF01061;mir-548;CABD01075799.2/302-219 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 60.0 bits (30), Expect = 5e-09
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaagaacctcag 72
||||||||| ||||||||||||||| ||| || ||| |||||||||||| | || |||
Sbjct: 82 ttaggttggtacaaaagtaattgcagcttttaccattactttcaatggcaaaagccgcag 23
Query: 73 ttgcttttgtgccaacctaata 94
|| |||||| |||||||||||
Sbjct: 22 ttacttttgcaccaacctaata 1
>RF01061;mir-548;CABD01346604.1/3997-4080 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 60.0 bits (30), Expect = 5e-09
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaagaacctcag 72
||||||||| |||||||||| ||| ||||| ||| | | || ||||||||| |||| ||
Sbjct: 82 ttaggttggtgcaaaagtaagtgcggtttttgccatcacttgcaatggcaaaaaccacaa 23
Query: 73 ttgcttttgtgccaacctaata 94
|| ||||||| |||||||||||
Sbjct: 22 ttacttttgtaccaacctaata 1
>RF01061;mir-548;ABGA01380877.1/47446-47363 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 58.0 bits (29), Expect = 2e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 15 aggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaa 63
||||||| |||||||||||||||||||| ||| || ||||||||||||
Sbjct: 80 aggttggtgcaaaagtaattgcagtttttgccattgctttcaatggcaa 32
>RF01061;mir-548;ABGA01258901.1/11428-11345 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 56.0 bits (28), Expect = 8e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttgg 44
||||||||| ||||||||||||||||||||||
Sbjct: 82 ttaggttggtgcaaaagtaattgcagttttgg 51
>RF01061;mir-548;AC163751.3/6942-6859 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 56.0 bits (28), Expect = 8e-08
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaagaacc 68
|||| |||| |||||||| ||||| ||||| ||| |||||||||||||||| ||||
Sbjct: 82 ttagcttggtgcaaaagtgattgcggtttttgccattattttcaatggcaaaaacc 27
>RF01061;mir-548;CABD01355261.2/2635-2552 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 56.0 bits (28), Expect = 8e-08
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaagaacctcag 72
|||||| ||| |||||||||||| ||||| ||| ||| |||||||||||| |||| ||
Sbjct: 82 ttaggtgggcacaaaagtaattgtggtttttgccattactttcaatggcaaaaaccgcaa 23
Query: 73 ttgcttttgtgccaacctaa 92
|| |||||| |||||||||
Sbjct: 22 ttacttttgctccaacctaa 3
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgcagtttt 42
||||||||| |||||||||||||| |||||
Sbjct: 3 ttaggttggagcaaaagtaattgcggtttt 32
>RF01061;mir-548;AADA01152819.1/20739-20822 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 54.0 bits (27), Expect = 3e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaa 63
||||||||| |||| |||| |||||||||| ||| ||| ||||||||||||
Sbjct: 82 ttaggttggtgcaagagtagttgcagtttttgccattactttcaatggcaa 32
>RF01061;mir-548;ABGA01209240.1/4651-4734 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 14 taggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaa 63
|||||||| |||||||||||||||||||| | | ||| ||| ||||||||
Sbjct: 81 taggttggtgcaaaagtaattgcagtttttggcattacttttaatggcaa 32
>RF01061;mir-548;AC074323.4/95680-95597 9606:Homo sapiens (human)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 16 ggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaagaacctcagttg 75
|||||| |||||||||||||| ||||| ||| ||| ||| |||||||| |||| || ||
Sbjct: 79 ggttggtgcaaaagtaattgcggtttttgccattacttttaatggcaaaaaccgcaatta 20
Query: 76 cttttg 81
||||||
Sbjct: 19 cttttg 14
>RF01061;mir-548;AADC01023522.1/7145-7062 9606:Homo sapiens
(human)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 14 taggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaa 63
|||||||| ||||| ||||||||||| || ||| ||| ||||||||||||
Sbjct: 81 taggttggtgcaaaggtaattgcagtatttgccattactttcaatggcaa 32
>RF01061;mir-548;AP001729.1/31449-31355 9606:Homo sapiens (human)
Length = 95
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgcagtttt 42
|||||||||||||||||||||||| |||||
Sbjct: 3 ttaggttggcgcaaaagtaattgcggtttt 32
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagtttt 42
|||||||||||||||||||||||| |||||
Sbjct: 93 ttaggttggcgcaaaagtaattgcggtttt 64
>RF01061;mir-548;AADC01102129.1/13137-13054 9606:Homo sapiens
(human)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 14 taggttggcgcaaaagtaattgcagttttggcctttattttcaatg 59
|||||||| |||||||||||||| ||||| ||| ||| ||||||||
Sbjct: 81 taggttggtgcaaaagtaattgcggtttttgccattactttcaatg 36
>RF01061;mir-548;AADD01036043.1/27192-27275 9606:Homo sapiens
(human)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcc 46
||||||||| |||||||||||||| |||||||||
Sbjct: 82 ttaggttggtgcaaaagtaattgcggttttggcc 49
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgcagttttg 43
||||||| | |||||||||||||||||||||
Sbjct: 3 ttaggttagtgcaaaagtaattgcagttttg 33
>RF01061;mir-548;CABD01195132.2/4219-4302 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaagaacctcag 72
|||||||| |||||||||||||||| ||| || ||| |||||||||||| | || |||
Sbjct: 82 ttaggttgctgcaaaagtaattgcaggttttgctattactttcaatggcaaaacccacag 23
Query: 73 ttgcttttgtgccaacctaata 94
|| |||||| ||||||||||
Sbjct: 22 ttacttttgcagcaacctaata 1
>RF01061;mir-548;CABD01009254.1/6580-6663 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagtttt 42
||||||||| ||||||||||||||||||||
Sbjct: 82 ttaggttggtgcaaaagtaattgcagtttt 53
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctt 48
||||||||| ||||||||||||| |||||||||||
Sbjct: 3 ttaggttggtgcaaaagtaattgtggttttggcctt 38
>RF01061;mir-548;CABD01343912.1/1154-1071 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaagaacctcag 72
||||||||| |||||||||||||| ||||| ||| || | ||||||||| |||| ||
Sbjct: 3 ttaggttggtgcaaaagtaattgcggtttttgccattcctgccaatggcaaaaaccgcaa 62
Query: 73 ttgcttttgtgccaacctaa 92
|| ||||||| ||||||||
Sbjct: 63 ttrcttttgtatcaacctaa 82
>RF01061;mir-548;AC198186.3/82008-82091 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 24 caaaagtaattgcagttttggcctttattttcaatggcaagaacctcagttgcttttg 81
||||||||||||| ||||| ||| |||||| ||||||||| |||| || || ||||||
Sbjct: 71 caaaagtaattgcggtttttgccattatttccaatggcaaaaaccgcaattacttttg 14
>RF01061;mir-548;AADC01126060.1/253363-253446 9606:Homo sapiens
(human)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaagaacctcag 72
||||| ||| |||||||||||||| ||||| ||| || |||| |||||||| |||| ||
Sbjct: 82 ttaggctggtgcaaaagtaattgcggtttttgccattgtttttaatggcaaaaaccgcaa 23
Query: 73 ttgcttttg 81
|| ||||||
Sbjct: 22 ttacttttg 14
>RF01061;mir-548;AC003681.1/24588-24671 9606:Homo sapiens (human)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaagaacctcag 72
|||| |||| |||||||||||| ||||||| ||| | ||||| |||||||| |||| ||
Sbjct: 82 ttagattggtgcaaaagtaattacagtttttgccatcatttttaatggcaaaaaccacaa 23
Query: 73 ttgcttttg 81
|| ||||||
Sbjct: 22 ttacttttg 14
>RF01061;mir-548;AANU01285209.1/57947-57864 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 12 tttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaagaacc 68
|||||||||| |||||||||||||| ||||| | | ||| ||| |||||||| ||||
Sbjct: 83 tttaggttggtgcaaaagtaattgcggtttttgtcattacttttaatggcaaaaacc 27
>RF01061;mir-548;ABGA01320162.1/292-375 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaagaacc 68
||||||||| ||||||||||| || ||||| | | ||| |||||||||||| ||||
Sbjct: 82 ttaggttggtgcaaaagtaatagcggtttttgtcattaatttcaatggcaaaaacc 27
>RF01061;mir-548;AADA01058244.1/14119-14036 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatgg 60
||||||||| |||||||||||||| |||| ||| ||| |||||||||
Sbjct: 82 ttaggttggggcaaaagtaattgcgatttttgccattactttcaatgg 35
>RF01061;mir-548;AADB02016080.1/5738062-5737979 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgcagtt 40
||||||||| ||||||||||||||||||
Sbjct: 3 ttaggttggtgcaaaagtaattgcagtt 30
>RF01061;mir-548;AANU01274414.1/2282-2365 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgc 36
||||||||||||||||||||||||
Sbjct: 3 ttaggttggcgcaaaagtaattgc 26
>RF01061;mir-548;AACZ02123200.1/20871-20786 9598:Pan troglodytes
(chimpanzee)
Length = 86
Score = 46.1 bits (23), Expect = 8e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgcagtttt 42
||||||||| |||||||||||||| |||||
Sbjct: 3 ttaggttggngcaaaagtaattgctgtttt 32
>RF01061;mir-548;AACZ02117558.1/10764-10847 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatg 59
||||||||| ||||| ||||| |||| ||| ||| ||||||||||||
Sbjct: 82 ttaggttggtgcaaatgtaatggcaggttttgccattattttcaatg 36
>RF01061;mir-548;AL008721.1/97595-97678 9606:Homo sapiens (human)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 12 tttaggttggcgcaaaagtaattgcag 38
|||||||||| ||||||||||||||||
Sbjct: 2 tttaggttggtgcaaaagtaattgcag 28
>RF01061;mir-548;AADC01134614.1/198131-198048 9606:Homo sapiens
(human)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaa 63
|||| |||| ||||||||||||||| ||| ||| ||| ||||||||||||
Sbjct: 82 ttagcttggtgcaaaagtaattgcaatttctgccattactttcaatggcaa 32
>RF01061;mir-548;CABD01214541.1/743-661 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 83
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgcagttttg 43
||||||||| |||||||| ||||||||||||
Sbjct: 3 ttaggttggtgcaaaagtcattgcagttttg 33
Score = 46.1 bits (23), Expect = 8e-05
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaa 63
|||||| || |||||||| ||||||||||||||| ||| ||| |||||||
Sbjct: 81 ttaggtgggtgcaaaagtcattgcagttttggccattacttttgatggcaa 31
>RF01061;mir-548;CABD01386540.1/401-318 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaa 63
||||||||| |||||||||||||||| ||| ||| || ||| ||||||||
Sbjct: 82 ttaggttggtgcaaaagtaattgcagcttttgccattgcttttaatggcaa 32
>RF01061;mir-548;CABD01203916.1/289-206 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaa 63
||||||||| || ||||||||||| |||| ||| ||| ||||||||||||
Sbjct: 82 ttaggttggtgccaaagtaattgcgatttttgccattactttcaatggcaa 32
>RF01061;mir-548;AANU01170885.1/1-85 9544:Macaca mulatta (rhesus
monkey)
Length = 85
Score = 46.1 bits (23), Expect = 8e-05
Identities = 69/83 (83%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcag-ttttggcctttattttcaatggcaagaacctca 71
|||||||| |||||||||||||||| |||| || ||| ||| |||||||| |||| ||
Sbjct: 83 ttaggttgatgcaaaagtaattgcagttttttgctgttacttttaatggcaaaaaccgca 24
Query: 72 gttgcttttgtgccaacctaata 94
|| |||||| |||||||||||
Sbjct: 23 attacttttgcaccaacctaata 1
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgcagtttt 42
||||||||| |||||||||||||| |||||
Sbjct: 3 ttaggttggtgcaaaagtaattgcggtttt 32
>RF01061;mir-548;AANU01115116.1/14393-14310 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaa 63
||||| |||||||||||||| ||||||||| || ||| |||||||||||
Sbjct: 82 ttaggctggcgcaaaagtaactgcagttttttccattaccttcaatggcaa 32
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgcag 38
||||||||| ||||||||||||||||
Sbjct: 3 ttaggttggtgcaaaagtaattgcag 28
>RF01061;mir-548;ABGA01173437.1/27298-27381 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagtttt 42
||||||||||||||||||||| |||||||
Sbjct: 82 ttaggttggcgcaaaagtaatcacagtttt 53
>RF01061;mir-548;AC187360.3/56002-56085 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagtttt 42
||||||||| || |||||||||||||||||
Sbjct: 82 ttaggttggtgcgaaagtaattgcagtttt 53
>RF01061;mir-548;AACZ02167777.1/2446-2529 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaagaacctcag 72
||||||||| |||||| ||||| ||||||| ||| ||| ||||||||| |||| |||
Sbjct: 82 ttaggttggggcaaaaataattacagtttttgccattaaaagcaatggcaaaaaccgcag 23
Query: 73 ttgcttttgtgccaacctaata 94
| |||||| |||||||||||
Sbjct: 22 tcacttttgccccaacctaata 1
>RF01061;mir-548;ABBA01068880.1/357-274 9606:Homo sapiens (human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgcagtttt 42
||||||||| |||||||||||||| |||||
Sbjct: 3 ttaggttggtgcaaaagtaattgcggtttt 32
>RF01061;mir-548;AC117179.4/116901-116818 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 14 taggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaa 63
|||||||| ||||| ||||||| ||||| ||| ||| ||||||||||||
Sbjct: 4 taggttggtgcaaacgtaattgtggtttttgccattactttcaatggcaa 53
>RF01061;mir-548;AADB02060964.1/614-531 9606:Homo sapiens (human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgcagtttt 42
|||| |||| ||||||||||||||||||||
Sbjct: 3 ttagtttggtgcaaaagtaattgcagtttt 32
>RF01061;mir-548;AADC01054028.1/147-64 9606:Homo sapiens (human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 67/82 (81%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaagaacctcag 72
||||||||| ||||||||||||| |||| ||| ||| ||| |||||||| ||| |
Sbjct: 3 ttaggttggtgcaaaagtaattgtgctttttgccattacttttaatggcaaaaactacga 62
Query: 73 ttgcttttgtgccaacctaata 94
||||||||| |||||||||||
Sbjct: 63 ttgcttttgcaccaacctaata 84
>RF01061;mir-548;AL136442.12/41490-41572 9606:Homo sapiens (human)
Length = 83
Score = 44.1 bits (22), Expect = 3e-04
Identities = 68/82 (82%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaagaacctcag 72
||||| ||| ||||||| || |||||||||| || ||| ||| |||||||| ||| |||
Sbjct: 81 ttaggctggtgcaaaagcaactgcagttttg-ccattacttttaatggcaaaaactgcag 23
Query: 73 ttgcttttgtgccaacctaata 94
||||||||| ||| |||||||
Sbjct: 22 ttgcttttgccccagcctaata 1
>RF01061;mir-548;ABSL01062835.1/19063-18980 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggca 62
||||||||| ||||||||||||| ||||| ||| ||| ||| |||||||
Sbjct: 3 ttaggttggtgcaaaagtaattgtggtttttgccattacttttaatggca 52
>RF01061;mir-548;ABSL01074616.1/61238-61321 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgcagtttt 42
||||||||| |||||| |||||||||||||
Sbjct: 3 ttaggttggtgcaaaaataattgcagtttt 32
>RF01061;mir-548;AADC01066816.1/395993-395910 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcc 46
||||||||| || ||||||||||| |||||||||
Sbjct: 3 ttaggttggtgctaaagtaattgcggttttggcc 36
>RF01061;mir-548;AADC01094388.1/15092-15175 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaagaacctcag 72
||||||||| ||||||| | |||| |||| ||| ||| |||||||||||| |||| ||
Sbjct: 82 ttaggttgggacaaaagtcactgcattttttgccattactttcaatggcaaaaaccacaa 23
Query: 73 ttgcttttgtgccaacctaata 94
| |||||| |||||||||||
Sbjct: 22 tgacttttgccccaacctaata 1
>RF01061;mir-548;AC117444.6/85961-86044 9606:Homo sapiens (human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagtttt 42
||||||||| |||||||||||||| |||||
Sbjct: 82 ttaggttggtgcaaaagtaattgcggtttt 53
>RF01061;mir-548;AC090451.6/112413-112496 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagtttt 42
||||||||| |||||||| |||||||||||
Sbjct: 82 ttaggttggtgcaaaagtgattgcagtttt 53
>RF01061;mir-548;ABSL01029623.1/494-577 9606:Homo sapiens (human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgcagtttt 42
||||||||| |||||||||||||| |||||
Sbjct: 3 ttaggttggtgcaaaagtaattgcggtttt 32
>RF01061;mir-548;CABD01117548.1/2434-2351 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 16 ggttggcgcaaaagtaattgcagttttggc 45
|||||| |||||||||||||||||| ||||
Sbjct: 6 ggttggtgcaaaagtaattgcagttctggc 35
>RF01061;mir-548;CABD01616280.2/84-1 9595:Gorilla gorilla gorilla
(Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgcagtttt 42
||||||||| |||||||||||| |||||||
Sbjct: 3 ttaggttggtgcaaaagtaattacagtttt 32
>RF01061;mir-548;CABD01089019.1/6160-6243 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgcagtttt 42
||||||||| |||||||||||||| |||||
Sbjct: 3 ttaggttggtgcaaaagtaattgcggtttt 32
>RF01061;mir-548;CABD01688067.1/1028-1113 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 86
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagtttt 42
||||||||| |||||||||||||| |||||
Sbjct: 84 ttaggttggtgcaaaagtaattgcggtttt 55
>RF01061;mir-548;CABD01378151.1/10643-10726 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagttttggcctttattttcaatggcaagaacctcag 72
||||||||| ||||||||||||| |||| ||| | | |||||||||||| | || ||
Sbjct: 82 ttaggttggtgcaaaagtaattgtgatttttgccgtaactttcaatggcaaaatccacaa 23
Query: 73 ttgcttttgtgccaacctaata 94
|| |||||| |||||||||||
Sbjct: 22 tttcttttgcaccaacctaata 1
>RF01061;mir-548;CABD01022860.2/18560-18643 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 13 ttaggttggcgcaaaagtaattgcagtttt 42
||||||||| ||||||| ||||||||||||
Sbjct: 82 ttaggttggtgcaaaagcaattgcagtttt 53
>RF01061;mir-548;AC202678.6/146907-146824 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 17 gttggcgcaaaagtaattgcagttttggcctttattttcaatggcaagaacctcagttgc 76
||||| |||||||||||||| || || ||| ||| |||||||| ||| |||| || || |
Sbjct: 78 gttggtgcaaaagtaattgcggtctttgccattactttcaatgacaaaaaccgcaattac 19
Query: 77 ttttgtgccaacct 90
||||| |||||||
Sbjct: 18 ttttgcaccaacct 5
>RF01061;mir-548;ABBV01001495.1/1250-1333 447454:candidate
division TM7 single-cell isolate TM7a
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttaggttggcgcaaaagtaattgcagtttt 42
||||||||| ||| ||||||||||||||||
Sbjct: 3 ttaggttggtgcataagtaattgcagtttt 32
