miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01061;mir-548;AANU01296214.1/2804-2721 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 89.7 bits (45), Expect = 7e-18
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
|||||||||||||||||||| ||||| |||||||| ||||||||||||||| |||||||
Sbjct: 9 tggtgcaaaagtaattgcgggttttgacattacttttaatggcaaaaactgcaattactt 68
Query: 82 ttgcaccagccta 94
||||| |||||||
Sbjct: 69 ttgcatcagccta 81
>RF01061;mir-548;AC202678.6/146907-146824 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 87.7 bits (44), Expect = 3e-17
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
|||||||||||||||||||||||||| ||||||||||||| ||||||| || |||||||
Sbjct: 76 tggtgcaaaagtaattgcggtctttgccattactttcaatgacaaaaaccgcaattactt 17
Query: 82 ttgcacca 89
||||||||
Sbjct: 16 ttgcacca 9
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 tggtgcaaaagtaattgcggtctttg 48
||||||||||||||||||||| ||||
Sbjct: 9 tggtgcaaaagtaattgcggtttttg 34
>RF01061;mir-548;AANU01123316.1/10409-10492 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 83.8 bits (42), Expect = 4e-16
Identities = 70/78 (89%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 21 gctggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgca-ttac 79
|||||||||||||||||||| || |||| |||||||||||||| |||||| || ||||
Sbjct: 78 gctggtgcaaaagtaattgcagtttttgccattactttcaatgggaaaaaccacagttac 19
Query: 80 ttttgcaccagcctacta 97
||||||||||||||||||
Sbjct: 18 ttttgcaccagcctacta 1
Score = 56.0 bits (28), Expect = 1e-07
Identities = 35/36 (97%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 60 aatggcaaaaactgca-ttacttttgcaccagccta 94
|||||||||||||||| |||||||||||||||||||
Sbjct: 46 aatggcaaaaactgcaattacttttgcaccagccta 81
>RF01061;mir-548;CABD01203916.1/289-206 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 81.8 bits (41), Expect = 2e-15
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
|||||| |||||||||||| | |||| |||||||||||||||||||||||| |||||||
Sbjct: 76 tggtgccaaagtaattgcgatttttgccattactttcaatggcaaaaactgcaattactt 17
Query: 82 ttgcaccagccta 94
| |||||||||||
Sbjct: 16 tggcaccagccta 4
>RF01061;mir-548;AC074323.4/95680-95597 9606:Homo sapiens (human)
Length = 84
Score = 79.8 bits (40), Expect = 7e-15
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
||||||||||||||||||||| |||| |||||||| |||||||||||| || |||||||
Sbjct: 76 tggtgcaaaagtaattgcggtttttgccattacttttaatggcaaaaaccgcaattactt 17
Query: 82 ttgcacca 89
||||||||
Sbjct: 16 ttgcacca 9
Score = 48.1 bits (24), Expect = 2e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
||||||||||||||||||||| |||| |||| |||||||||||| || |||||||
Sbjct: 9 tggtgcaaaagtaattgcggtttttgccattaaaagtaatggcaaaaaccgcaattactt 68
Query: 82 ttgcacca 89
||||||||
Sbjct: 69 ttgcacca 76
>RF01061;mir-548;AADC01142453.1/7445-7528 9606:Homo sapiens
(human)
Length = 84
Score = 79.8 bits (40), Expect = 7e-15
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 24 ggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attacttt 82
|||||||||||||||||||| ||| |||||||||| ||||| ||||||| ||||||||
Sbjct: 75 ggtgcaaaagtaattgcggttcttgccattactttcagtggcagaaactgcaattacttt 16
Query: 83 tgcaccagccta 94
||||||||||||
Sbjct: 15 tgcaccagccta 4
>RF01061;mir-548;AADA01051643.1/6626-6709 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 73.8 bits (37), Expect = 4e-13
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
||||||||||||||||| |||| ||| |||||||||||||||||||||| | || ||||
Sbjct: 76 tggtgcaaaagtaattgtggtcattgccattactttcaatggcaaaaactacaatcactt 17
Query: 82 ttgcaccagccta 94
|||||||| ||||
Sbjct: 16 ttgcaccaaccta 4
>RF01061;mir-548;AANU01106767.1/8226-8143 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 73.8 bits (37), Expect = 4e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 21 gctggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attac 79
||||||||||||||||||||||| |||| |||||||| ||||| ||||||||| |||||
Sbjct: 78 gctggtgcaaaagtaattgcggtttttgccattacttttaatggtaaaaactgcaattac 19
Query: 80 ttttgcacc 88
||| |||||
Sbjct: 18 tttcgcacc 10
Score = 48.1 bits (24), Expect = 2e-05
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 60 aatggcaaaaactgca-ttacttttgcaccagccta 94
|||||||||||| ||| |||||||||||||||||||
Sbjct: 46 aatggcaaaaaccgcaattacttttgcaccagccta 81
>RF01061;mir-548;AADC01134614.1/198131-198048 9606:Homo sapiens
(human)
Length = 84
Score = 71.9 bits (36), Expect = 2e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgca-ttactt 81
|||||||||||||||||| | | || ||||||||||||||||||||||||| ||||||
Sbjct: 76 tggtgcaaaagtaattgcaatttctgccattactttcaatggcaaaaactgcatttactt 17
Query: 82 ttgcacca 89
||||||||
Sbjct: 16 ttgcacca 9
>RF01061;mir-548;AC198186.3/82008-82091 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 71.9 bits (36), Expect = 2e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 28 caaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attacttttgca 86
|||||||||||||||| |||| |||| || ||||||||||||| || ||||||||||||
Sbjct: 71 caaaagtaattgcggtttttgccattatttccaatggcaaaaaccgcaattacttttgca 12
Query: 87 ccagccta 94
||||||||
Sbjct: 11 ccagccta 4
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 21 gctggtgcaaaagtaattgcggtctttg 48
||||||||||||||||||||||| ||||
Sbjct: 7 gctggtgcaaaagtaattgcggtttttg 34
>RF01061;mir-548;AADB02009973.1/796632-796715 9606:Homo sapiens
(human)
Length = 84
Score = 67.9 bits (34), Expect = 3e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 21 gctggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attac 79
||||||||||||||||| | |||||||| |||||||||||||||||| || | |||||
Sbjct: 78 gctggtgcaaaagtaatcgtggtctttgccattactttcaatggcaaagaccacgattac 19
Query: 80 ttttgcacca 89
||||||||||
Sbjct: 18 ttttgcacca 9
>RF01061;mir-548;AADC01126060.1/253363-253446 9606:Homo sapiens
(human)
Length = 84
Score = 67.9 bits (34), Expect = 3e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 21 gctggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attac 79
||||||||||||||||||||||| |||| ||| ||| |||||||||||| || |||||
Sbjct: 78 gctggtgcaaaagtaattgcggtttttgccattgtttttaatggcaaaaaccgcaattac 19
Query: 80 ttttgcacca 89
||||||||||
Sbjct: 18 ttttgcacca 9
Score = 65.9 bits (33), Expect = 1e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
||||||||||||||||||||| |||| |||| ||||||||||||| || |||||||
Sbjct: 9 tggtgcaaaagtaattgcggtttttgccattaaaaacaatggcaaaaaccgcaattactt 68
Query: 82 ttgcaccagccta 94
|||||||||||||
Sbjct: 69 ttgcaccagccta 81
>RF01061;mir-548;ABGA01380877.1/47446-47363 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 65.9 bits (33), Expect = 1e-10
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
|||||||||||||||||| || |||| ||| ||||||||||||||| |||| |||||||
Sbjct: 76 tggtgcaaaagtaattgcagtttttgccattgctttcaatggcaaaagctgcaattactt 17
Query: 82 ttgca 86
|||||
Sbjct: 16 ttgca 12
Score = 48.1 bits (24), Expect = 2e-05
Identities = 31/32 (96%), Gaps = 1/32 (3%)
Strand = Plus / Plus
Query: 59 caatggcaaaaactgc-attacttttgcacca 89
|||||||||||||||| |||||||||||||||
Sbjct: 45 caatggcaaaaactgcaattacttttgcacca 76
>RF01061;mir-548;ABGA01209240.1/4651-4734 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 65.9 bits (33), Expect = 1e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
|||||||||||||||||| || |||| |||||||| ||||||||||| ||| || ||||
Sbjct: 76 tggtgcaaaagtaattgcagtttttggcattacttttaatggcaaaaaatgcaataactt 17
Query: 82 ttgcaccagccta 94
|||||||| ||||
Sbjct: 16 ttgcaccaaccta 4
>RF01061;mir-548;AADC01023522.1/7145-7062 9606:Homo sapiens
(human)
Length = 84
Score = 65.9 bits (33), Expect = 1e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
||||||||| |||||||| || |||| |||||||||||||||||||| ||| ||||| |
Sbjct: 76 tggtgcaaaggtaattgcagtatttgccattactttcaatggcaaaaagtgcaattacct 17
Query: 82 ttgcaccagccta 94
|||||||| ||||
Sbjct: 16 ttgcaccaaccta 4
>RF01061;mir-548;AADC01066816.1/395993-395910 9606:Homo sapiens
(human)
Length = 84
Score = 65.9 bits (33), Expect = 1e-10
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 31 aagtaattgcggtctttgatattactttcaatggcaaaaactgc-attacttttgcacca 89
||||||||||||| ||||| ||||||||||||||| ||||| || |||||||| ||||||
Sbjct: 68 aagtaattgcggtttttgacattactttcaatggccaaaaccgcaattactttagcacca 9
Query: 90 gccta 94
||||
Sbjct: 8 accta 4
>RF01061;mir-548;AC090451.6/112413-112496 9606:Homo sapiens
(human)
Length = 84
Score = 65.9 bits (33), Expect = 1e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
|||||||||||| |||| ||| |||| | ||||||| ||||||||||||||| || ||||
Sbjct: 9 tggtgcaaaagtgattgtggtttttgctgttacttttaatggcaaaaactgcaatcactt 68
Query: 82 ttgcaccagccta 94
|||||||| ||||
Sbjct: 69 ttgcaccaaccta 81
>RF01061;mir-548;CABD01007255.1/6013-6096 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 65.9 bits (33), Expect = 1e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
|||||||||||||||| |||| |||| ||||| || |||||||||||| | |||||||
Sbjct: 76 tggtgcaaaagtaattacggtttttgctattatatttaatggcaaaaaccacaattactt 17
Query: 82 ttgcaccagccta 94
|||||||||||||
Sbjct: 16 ttgcaccagccta 4
>RF01061;mir-548;AANU01285209.1/57947-57864 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaac 71
||||||||||||||||||||| |||| |||||||| ||||||||||||
Sbjct: 76 tggtgcaaaagtaattgcggtttttgtcattacttttaatggcaaaaac 28
>RF01061;mir-548;ABBV01001495.1/1250-1333 447454:candidate
division TM7 single-cell isolate TM7a
Length = 84
Score = 65.9 bits (33), Expect = 1e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
||||||| |||||||||||| |||| |||||||| ||||||||||||||| |||||||
Sbjct: 76 tggtgcacaagtaattgcgggttttgccattacttttaatggcaaaaactgcaattactt 17
Query: 82 ttgcaccagccta 94
||||||| ||||
Sbjct: 16 atgcaccaaccta 4
>RF01061;mir-548;ABGA01320162.1/292-375 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 63.9 bits (32), Expect = 4e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
||||||||||||||| ||||| |||| |||| |||||||||||||||| || ||||||
Sbjct: 76 tggtgcaaaagtaatagcggtttttgtcattaatttcaatggcaaaaaccgcaattactc 17
Query: 82 ttgcacca 89
||||||||
Sbjct: 16 ttgcacca 9
>RF01061;mir-548;AC163751.3/6942-6859 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 63.9 bits (32), Expect = 4e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
|||||||||||| |||||||| |||| |||| |||||||||||||||| || || ||||
Sbjct: 76 tggtgcaaaagtgattgcggtttttgccattattttcaatggcaaaaaccgcaatcactt 17
Query: 82 ttgcacca 89
||||||||
Sbjct: 16 ttgcacca 9
>RF01061;mir-548;AADA01152819.1/20739-20822 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 63.9 bits (32), Expect = 4e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
|||||||| |||| |||| || |||| |||||||||||||||||||||||| | |||||
Sbjct: 76 tggtgcaagagtagttgcagtttttgccattactttcaatggcaaaaactgcaactactt 17
Query: 82 ttgcacca 89
||||||||
Sbjct: 16 ttgcacca 9
>RF01061;mir-548;AADC01117423.1/979850-979767 9606:Homo sapiens
(human)
Length = 84
Score = 63.9 bits (32), Expect = 4e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
||||| ||||||||||| ||| |||| |||||||| |||||||||||| || |||||||
Sbjct: 76 tggtgtaaaagtaattgtggtttttgcaattacttttaatggcaaaaaccgcaattactt 17
Query: 82 ttgcacca 89
||||||||
Sbjct: 16 ttgcacca 9
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 tggtgcaaaagtaattgcggtctttg 48
||||||||||||||||||||| ||||
Sbjct: 9 tggtgcaaaagtaattgcggtttttg 34
>RF01061;mir-548;AADB02060964.1/614-531 9606:Homo sapiens (human)
Length = 84
Score = 63.9 bits (32), Expect = 4e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
|||||||||| ||||||| || |||| | |||||||| ||||||||||||| |||||||
Sbjct: 76 tggtgcaaaaataattgcagtttttgccactactttcagtggcaaaaactgcaattactt 17
Query: 82 ttgcacca 89
||||||||
Sbjct: 16 ttgcacca 9
>RF01061;mir-548;ABSL01074616.1/61238-61321 9606:Homo sapiens
(human)
Length = 84
Score = 63.9 bits (32), Expect = 4e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 24 ggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attacttt 82
||||||||||||||||| || ||| |||||| ||||||||||||||||| |||| |||
Sbjct: 75 ggtgcaaaagtaattgcagtttttaccattactgtcaatggcaaaaactgcaattatttt 16
Query: 83 tgcaccagccta 94
||||||| ||||
Sbjct: 15 tgcaccaaccta 4
>RF01061;mir-548;ABSL01029623.1/494-577 9606:Homo sapiens (human)
Length = 84
Score = 63.9 bits (32), Expect = 4e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
||||||||||||||||||||| |||| |||| |||||||||| |||| | | |||||||
Sbjct: 9 tggtgcaaaagtaattgcggtttttgctattgctttcaatggtaaaagccacgattactt 68
Query: 82 ttgcacca 89
||||||||
Sbjct: 69 ttgcacca 76
>RF01061;mir-548;CABD01355261.2/2635-2552 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 63.9 bits (32), Expect = 4e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 28 caaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attacttttgca 86
|||||||||||| ||| |||| ||||||||||||||||||||| || |||||||||||
Sbjct: 71 caaaagtaattgtggtttttgccattactttcaatggcaaaaaccgcaattacttttgct 12
Query: 87 ccagccta 94
||| ||||
Sbjct: 11 ccaaccta 4
>RF01061;mir-548;AADC01143663.1/88187-88104 9606:Homo sapiens
(human)
Length = 84
Score = 61.9 bits (31), Expect = 2e-09
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 25 gtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactttt 83
||||||||||||| |||||||||| |||||||| ||||||||| || || |||||||||
Sbjct: 74 gtgcaaaagtaatcgcggtctttgccattacttttaatggcaaagaccgcgattactttt 15
Query: 84 gca 86
|||
Sbjct: 14 gca 12
>RF01061;mir-548;AADC01144176.1/293955-294038 9606:Homo sapiens
(human)
Length = 84
Score = 61.9 bits (31), Expect = 2e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 21 gctggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attac 79
|||||| |||||||| ||||||| |||| |||||||||||||||| ||| || |||||
Sbjct: 78 gctggtacaaaagtagttgcggtttttgccgttactttcaatggcaagaaccgcaattac 19
Query: 80 ttttgcaccagccta 94
|||||||||| ||||
Sbjct: 18 ttttgcaccaaccta 4
>RF01061;mir-548;AADC01015752.1/126987-127070 9606:Homo sapiens
(human)
Length = 84
Score = 61.9 bits (31), Expect = 2e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 25 gtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactttt 83
||||||| |||| |||||| |||| ||||||||||||||||||||| || ||||| |||
Sbjct: 74 gtgcaaacgtaaatgcggtttttgccattactttcaatggcaaaaaccgcaattacattt 15
Query: 84 gcaccagccta 94
|||||| ||||
Sbjct: 14 gcaccaaccta 4
>RF01061;mir-548;AADC01102129.1/13137-13054 9606:Homo sapiens
(human)
Length = 84
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaa 69
||||||||||||||||||||| |||| ||||||||||||| |||||
Sbjct: 76 tggtgcaaaagtaattgcggtttttgccattactttcaatgacaaaa 30
>RF01061;mir-548;ABBA01063869.1/23093-23176 9606:Homo sapiens
(human)
Length = 84
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 21 gctggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgca 75
||||||||||||| |||||| || |||| ||||||||| ||| ||||||||||||
Sbjct: 78 gctggtgcaaaagcaattgcagtttttggtattacttttaatagcaaaaactgca 24
>RF01061;mir-548;ABGA01227794.1/7074-6991 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 60.0 bits (30), Expect = 6e-09
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 21 gctggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attac 79
|||| ||||||| |||||||||| |||| | |||| |||||||||||||| || |||||
Sbjct: 78 gctgatgcaaaactaattgcggtttttgccactactgtcaatggcaaaaaccgcaattac 19
Query: 80 ttttgcacca 89
||||||||||
Sbjct: 18 ttttgcacca 9
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 tggtgcaaaagtaattgcggtctttg 48
||||||||||||||||||||| ||||
Sbjct: 9 tggtgcaaaagtaattgcggtttttg 34
>RF01061;mir-548;AADB02001154.1/69220-69137 9606:Homo sapiens
(human)
Length = 84
Score = 60.0 bits (30), Expect = 6e-09
Identities = 65/74 (87%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcgg-tctttgatattactttcaatggcaaaaactg-cattact 80
||||||||||||||| |||| | |||| ||||||||||||||||||| | | |||||||
Sbjct: 77 tggtgcaaaagtaatggcgggtttttgccattactttcaatggcaaaacccgccattact 18
Query: 81 tttgcaccagccta 94
||||||||| ||||
Sbjct: 17 tttgcaccaaccta 4
>RF01061;mir-548;AADB02010442.1/1775967-1775884 9606:Homo sapiens
(human)
Length = 84
Score = 60.0 bits (30), Expect = 6e-09
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 26 tgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attacttttg 84
|||||||||||||||||| |||| ||| |||| |||||||||||| || ||||||||||
Sbjct: 73 tgcaaaagtaattgcggtttttgtcattgctttgaatggcaaaaaccgcaattacttttg 14
Query: 85 ca 86
||
Sbjct: 13 ca 12
>RF01061;mir-548;CABD01117548.1/2434-2351 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 60.0 bits (30), Expect = 6e-09
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 21 gctggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attac 79
||||||||||||||||||||||| |||| | |||||| ||| || | |||||| |||||
Sbjct: 78 gctggtgcaaaagtaattgcggtttttgcaactacttttaattgccagaactgcaattac 19
Query: 80 ttttgcacca 89
||||||||||
Sbjct: 18 ttttgcacca 9
>RF01061;mir-548;AANU01230369.1/6404-6321 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaa 68
||||||||||||||||| |||||||| |||||||| |||||||||
Sbjct: 9 tggtgcaaaagtaattgtggtctttgtcattacttttaatggcaaa 54
>RF01061;mir-548;BS000196.1/176390-176307 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 58.0 bits (29), Expect = 3e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgca-ttactt 81
|||||||||||| | |||| | |||| ||||||||||||||||||||| ||| | ||||
Sbjct: 76 tggtgcaaaagtcactgcgatttttgccattactttcaatggcaaaaacagcagtgactt 17
Query: 82 ttgcaccagccta 94
|||||||| ||||
Sbjct: 16 ttgcaccaaccta 4
>RF01061;mir-548;AACZ02147953.1/7033-7116 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 58.0 bits (29), Expect = 3e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
|||||||||||||||| || ||| |||||||||||||||||||||| | |||||||
Sbjct: 76 tggtgcaaaagtaattatggcttttactattactttcaatggcaaaaaccacaattactt 17
Query: 82 ttgcaccagccta 94
|||||||| ||||
Sbjct: 16 ttgcaccaaccta 4
>RF01061;mir-548;AL008721.1/97595-97678 9606:Homo sapiens (human)
Length = 84
Score = 58.0 bits (29), Expect = 3e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
||||||||||| | |||| || |||| |||||||| |||||||||| |||| |||||||
Sbjct: 76 tggtgcaaaagaatttgcagtttttgccattacttttaatggcaaaagctgcaattactt 17
Query: 82 ttgcaccagccta 94
|||||||| ||||
Sbjct: 16 ttgcaccaaccta 4
>RF01061;mir-548;ABBA01068880.1/357-274 9606:Homo sapiens (human)
Length = 84
Score = 58.0 bits (29), Expect = 3e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
||||| |||||||||||||||||| ||||||||||||| |||||| || |||||||
Sbjct: 76 tggtgtaaaagtaattgcggtcttcaccgttactttcaatggtaaaaaccgcaattactt 17
Query: 82 ttgcaccagccta 94
|||||||| ||||
Sbjct: 16 ttgcaccaaccta 4
>RF01061;mir-548;AC117179.4/116901-116818 9606:Homo sapiens
(human)
Length = 84
Score = 58.0 bits (29), Expect = 3e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
||||||||| ||||||| ||| |||| |||||||||||||||||||| || ||||| |
Sbjct: 9 tggtgcaaacgtaattgtggtttttgccattactttcaatggcaaaaatcgcaattacgt 68
Query: 82 ttgcaccagccta 94
|||||||| ||||
Sbjct: 69 ttgcaccaaccta 81
>RF01061;mir-548;AADC01054028.1/147-64 9606:Homo sapiens (human)
Length = 84
Score = 58.0 bits (29), Expect = 3e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
||||||||||||||||| | | |||| |||||||| ||||||||||||| | ||| |||
Sbjct: 9 tggtgcaaaagtaattgtgctttttgccattacttttaatggcaaaaactacgattgctt 68
Query: 82 ttgcaccagccta 94
|||||||| ||||
Sbjct: 69 ttgcaccaaccta 81
>RF01061;mir-548;AL023583.25/57094-57177 9606:Homo sapiens (human)
Length = 84
Score = 58.0 bits (29), Expect = 3e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
||||||||||||| ||||||| |||| ||||||| ||||||||||| | || | |||||
Sbjct: 76 tggtgcaaaagtagttgcggtttttgccattacttgcaatggcaaaagccgcaactactt 17
Query: 82 ttgcaccagccta 94
|||||||| ||||
Sbjct: 16 ttgcaccaaccta 4
>RF01061;mir-548;CABD01386540.1/401-318 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 58.0 bits (29), Expect = 3e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgca-ttactt 81
|||||||||||||||||| | |||| ||| |||| ||||||||||| | || ||||||
Sbjct: 76 tggtgcaaaagtaattgcagcttttgccattgcttttaatggcaaaaattacaattactt 17
Query: 82 ttgcaccagccta 94
|||||||||||||
Sbjct: 16 ttgcaccagccta 4
>RF01061;mir-548;AANU01236941.1/3584-3501 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 58.0 bits (29), Expect = 3e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
||||||||||| ||||||||| |||| | ||||||||||| || ||||||| |||| ||
Sbjct: 76 tggtgcaaaagcaattgcggtttttgtcactactttcaatgacataaactgcaattaatt 17
Query: 82 ttgcaccagccta 94
|||||||| ||||
Sbjct: 16 ttgcaccaaccta 4
>RF01061;mir-548;AACZ02184973.1/13727-13644 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 56.0 bits (28), Expect = 1e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgca-ttactt 81
|||||||||||||| |||||| |||| ||| ||||| ||||||||||| || ||||||
Sbjct: 76 tggtgcaaaagtaactgcggtttttgccattgctttcgatggcaaaaaccacagttactt 17
Query: 82 ttgcacca 89
||||||||
Sbjct: 16 ttgcacca 9
>RF01061;mir-548;ABSL01073318.1/15548-15465 9606:Homo sapiens
(human)
Length = 84
Score = 56.0 bits (28), Expect = 1e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
|||||||||||| |||||||| || || |||||||||||||||||| || |||||||
Sbjct: 76 tggtgcaaaagttattgcggttcttaccatcactttcaatggcaaaaaccgcaattactt 17
Query: 82 ttgcacca 89
||||||||
Sbjct: 16 ttgcacca 9
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 tggtgcaaaagtaattgcggtctttg 48
||||||||||||||||||||| ||||
Sbjct: 9 tggtgcaaaagtaattgcggtttttg 34
>RF01061;mir-548;CABD01195132.2/4219-4302 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 26 tgcaaaagtaattgcggtctttgatattactttcaatggcaaaa 69
||||||||||||||| | |||| ||||||||||||||||||||
Sbjct: 73 tgcaaaagtaattgcaggttttgctattactttcaatggcaaaa 30
>RF01061;mir-548;CABD01085041.1/3135-3052 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 56.0 bits (28), Expect = 1e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
||||||||||| |||||| || ||| ||||||||| ||||||||||| || |||||||
Sbjct: 76 tggtgcaaaagaaattgcagttcttgccattactttccatggcaaaaaccgcaattactt 17
Query: 82 ttgcacca 89
||||||||
Sbjct: 16 ttgcacca 9
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 tggtgcaaaagtaattgcggtctttg 48
||||||||||||||||||||| ||||
Sbjct: 9 tggtgcaaaagtaattgcggtttttg 34
>RF01061;mir-548;AL136442.12/41490-41572 9606:Homo sapiens (human)
Length = 83
Score = 54.0 bits (27), Expect = 4e-07
Identities = 65/75 (86%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 21 gctggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgca-ttac 79
||||||||||||| || ||| || |||| |||||||| |||||||||||||||| || |
Sbjct: 77 gctggtgcaaaagcaactgcagt-tttgccattacttttaatggcaaaaactgcagttgc 19
Query: 80 ttttgcaccagccta 94
|||||| ||||||||
Sbjct: 18 ttttgccccagccta 4
>RF01061;mir-548;ABSL01062835.1/19063-18980 9606:Homo sapiens
(human)
Length = 84
Score = 54.0 bits (27), Expect = 4e-07
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggca-aaaactgcattactt 81
||||||||||||||||| ||| |||| |||||||| ||||||| ||| || |||||||
Sbjct: 9 tggtgcaaaagtaattgtggtttttgccattacttttaatggcagaaatctcaattactt 68
Query: 82 ttgcacc 88
|||||||
Sbjct: 69 ttgcacc 75
>RF01061;mir-548;CABD01001244.1/12488-12571 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 54.0 bits (27), Expect = 4e-07
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 21 gctggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgca-ttac 79
|||||| ||||| ||||||| || |||| |||||||| |||||||||| | ||| ||||
Sbjct: 78 gctggtacaaaaataattgctgtttttgccattacttttaatggcaaaatccgcaattac 19
Query: 80 ttttgcaccagccta 94
|||||||||| ||||
Sbjct: 18 ttttgcaccaaccta 4
>RF01061;mir-548;CABD01078688.1/32-114 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 83
Score = 54.0 bits (27), Expect = 4e-07
Identities = 63/73 (86%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
||||||||||||||| || || |||| |||| ||||||| ||||||||||| |||||||
Sbjct: 75 tggtgcaaaagtaatcgcagt-tttgccattattttcaatrgcaaaaactgcgattactt 17
Query: 82 ttgcaccagccta 94
|||| ||| ||||
Sbjct: 16 ttgcgccaaccta 4
>RF01061;mir-548;CABD01319512.1/496-413 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 54.0 bits (27), Expect = 4e-07
Identities = 55/63 (87%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 26 tgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attacttttg 84
||||||||||| |||||| |||| ||||||||||| ||||| ||| || ||||||||||
Sbjct: 73 tgcaaaagtaactgcggtttttgccattactttcaacggcaataaccgcaattacttttg 14
Query: 85 cac 87
|||
Sbjct: 13 cac 11
>RF01061;mir-548;AANU01170885.1/1-85 9544:Macaca mulatta (rhesus
monkey)
Length = 85
Score = 54.0 bits (27), Expect = 4e-07
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 26 tgcaaaagtaattgcggtcttt-gatattactttcaatggcaaaaactgca-ttactttt 83
||||||||||||||| || ||| | | ||||||| |||||||||||| ||| ||||||||
Sbjct: 74 tgcaaaagtaattgcagttttttgctgttacttttaatggcaaaaaccgcaattactttt 15
Query: 84 gcaccagccta 94
|||||| ||||
Sbjct: 14 gcaccaaccta 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 tggtgcaaaagtaattgcggtctttg 48
||||||||||||||||||||| ||||
Sbjct: 9 tggtgcaaaagtaattgcggtttttg 34
>RF01061;mir-548;AANU01115116.1/14393-14310 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 54.0 bits (27), Expect = 4e-07
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 21 gctggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attac 79
||||| |||||||||| ||| || ||| ||||| ||||||||||||| |||| |||||
Sbjct: 78 gctggcgcaaaagtaactgcagttttttccattaccttcaatggcaaaacctgcaattac 19
Query: 80 ttttgcaccagccta 94
|||||||||| ||||
Sbjct: 18 ttttgcaccaaccta 4
>RF01061;mir-548;AANU01272376.1/8292-8209 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 52.0 bits (26), Expect = 2e-06
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgca-ttactt 81
||||||||||||||||||||| | |||||||||| |||||||||| ||| ||||||
Sbjct: 76 tggtgcaaaagtaattgcggtttccaccattactttcagtggcaaaaacggcaattactt 17
Query: 82 ttgcac 87
||||||
Sbjct: 16 ttgcac 11
>RF01061;mir-548;ABGA01258901.1/11428-11345 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 50.1 bits (25), Expect = 6e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgca 75
|||||||||||||||||| || || | ||| | |||||||||||||||||||
Sbjct: 76 tggtgcaaaagtaattgcagttttggtcattgccttcaatggcaaaaactgca 24
>RF01061;mir-548;AC187360.3/56002-56085 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 50.1 bits (25), Expect = 6e-06
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgca-ttactt 81
|||||| ||||||||||| || |||| ||||||||| | |||||||||||| ||||||
Sbjct: 76 tggtgcgaaagtaattgcagtttttgctattacttttgacagcaaaaactgcagttactt 17
Query: 82 ttgcaccagccta 94
| |||||| ||||
Sbjct: 16 tcgcaccaaccta 4
>RF01061;mir-548;AACZ02013314.1/14210-14127 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaac 71
|||||||||||| |||||||| |||| ||| |||||| ||||||||||
Sbjct: 76 tggtgcaaaagttattgcggtttttgccattgctttcagtggcaaaaac 28
>RF01061;mir-548;AADB02037333.1/77827-77910 9606:Homo sapiens
(human)
Length = 84
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaac 71
|||||||||||| |||| ||| |||| |||||||||| ||||||||||
Sbjct: 9 tggtgcaaaagtgattgtggtttttgccattactttcagtggcaaaaac 57
>RF01061;mir-548;CABD01142179.1/4659-4576 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 50.1 bits (25), Expect = 6e-06
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgca-ttactt 81
||||||||||||||||| | |||| || ||||| |||||||||||| ||| ||||||
Sbjct: 76 tggtgcaaaagtaattgttatttttgccatgacttttaatggcaaaaacagcacttactt 17
Query: 82 ttgcaccagccta 94
|||||||| ||||
Sbjct: 16 ttgcaccaaccta 4
>RF01061;mir-548;CABD01075799.2/302-219 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 50.1 bits (25), Expect = 6e-06
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 51 attactttcaatggcaaaaactgca-ttacttttgcaccagccta 94
||||||||||||||||||| | ||| |||||||||||||| ||||
Sbjct: 48 attactttcaatggcaaaagccgcagttacttttgcaccaaccta 4
>RF01061;mir-548;CABD01343912.1/1154-1071 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaac 71
||||||||||||||||||||| |||| ||| || |||||||||||||
Sbjct: 9 tggtgcaaaagtaattgcggtttttgccattcctgccaatggcaaaaac 57
>RF01061;mir-548;CABD01346604.1/3997-4080 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaac 71
|||||||||||||| |||||| |||| || |||| |||||||||||||
Sbjct: 76 tggtgcaaaagtaagtgcggtttttgccatcacttgcaatggcaaaaac 28
>RF01061;mir-548;AANU01235723.1/7676-7593 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 51 attactttcaatggcaaaaactgca 75
|||||||||||||||||||||||||
Sbjct: 48 attactttcaatggcaaaaactgca 24
>RF01061;mir-548;AACZ02123200.1/20871-20786 9598:Pan troglodytes
(chimpanzee)
Length = 86
Score = 48.1 bits (24), Expect = 2e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaa 70
|||||||||||||||||| ||||| | |||||| | |||||||||||
Sbjct: 78 tggtgcaaaagtaattgccgtcttcgccattactgttaatggcaaaaa 31
>RF01061;mir-548;AADA01058244.1/14119-14036 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 27 gcaaaagtaattgcggtctttgatattactttcaatggcaaaaa 70
||||||||||||||| | |||| |||||||||||||| |||||
Sbjct: 72 gcaaaagtaattgcgatttttgccattactttcaatggtaaaaa 29
>RF01061;mir-548;AC011709.11/112131-112214 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactg-cattactt 81
||||||||| |||| || ||| |||| |||||||| |||||||||||| | |||||| |
Sbjct: 76 tggtgcaaatgtaactgtggtttttgcaattacttttaatggcaaaaaccgccattacat 17
Query: 82 ttgcacca 89
||||||||
Sbjct: 16 ttgcacca 9
>RF01061;mir-548;CABD01629527.1/781-698 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 26 tgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attacttttg 84
||||||||| ||||| || |||| || ||||| |||||||||||||| || |||||||
Sbjct: 73 tgcaaaagtcattgcrgtttttgccatgacttttgatggcaaaaactgcaataacttttg 14
Query: 85 caccagccta 94
|| |||||||
Sbjct: 13 cagcagccta 4
>RF01061;mir-548;AANU01270843.1/85523-85605 9544:Macaca mulatta
(rhesus monkey)
Length = 83
Score = 48.1 bits (24), Expect = 2e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 26 tgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgcattacttttgc 85
|||||||||||||||||| |||| |||||||| | | |||||| | |||||||||||
Sbjct: 72 tgcaaaagtaattgcggtttttgcaattacttttagttgcaaaaccacaattacttttgc 13
Query: 86 acca 89
||||
Sbjct: 12 acca 9
>RF01061;mir-548;AANU01283759.1/9595-9678 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 60 aatggcaaaaactgc-attacttttgcaccagccta 94
||||||||||||||| |||||||||| |||||||||
Sbjct: 46 aatggcaaaaactgcaattacttttgtaccagccta 81
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 21 gctggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaac 71
|||||| ||||||||||||| || |||| |||||||| |||| |||||||
Sbjct: 78 gctggtacaaaagtaattgcagtttttgccattacttttaatgacaaaaac 28
>RF01061;mir-548;AACZ02061421.1/862-945 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 24 ggtgcaaaagtaattgcggtctttgatattactttcaatggca 66
|||||||||||||||| ||| |||| |||||||| |||||||
Sbjct: 75 ggtgcaaaagtaattgtggtttttgccattacttttaatggca 33
>RF01061;mir-548;AADC01015139.1/1187-1100 9606:Homo sapiens
(human)
Length = 88
Score = 46.1 bits (23), Expect = 1e-04
Identities = 61/72 (84%), Gaps = 5/72 (6%)
Strand = Plus / Plus
Query: 23 tggtgcaaaagtaattgcggtctttgatat----tactttcaatggcaaaaactgc-att 77
||||||||||||||||||||| |||| || ||| || |||||||||||| || |||
Sbjct: 9 tggtgcaaaagtaattgcggtttttgccatgccatacctttaatggcaaaaaccgcaatt 68
Query: 78 acttttgcacca 89
||||||||||||
Sbjct: 69 acttttgcacca 80
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttg 48
||||||||||||||||||||| ||||
Sbjct: 80 tggtgcaaaagtaattgcggtttttg 55
>RF01061;mir-548;AADB02001899.1/605621-605538 9606:Homo sapiens
(human)
Length = 84
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 25 gtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaac 71
|||||||||| |||||||| |||| ||||||||||| ||||||||
Sbjct: 74 gtgcaaaagtcattgcggtttttgccattactttcaaaagcaaaaac 28
>RF01061;mir-548;AADB02011915.1/382962-383045 9606:Homo sapiens
(human)
Length = 84
Score = 46.1 bits (23), Expect = 1e-04
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 24 ggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attacttt 82
|||||||||||||||||| ||| ||||||||||||||||||| || ||||||||
Sbjct: 75 ggtgcaaaagtaattgcgagttttaccattactttcaatggcaaaactggcaattacttt 16
Query: 83 tgcacca 89
|||||||
Sbjct: 15 tgcacca 9
>RF01061;mir-548;AADC01022461.1/57990-57907 9606:Homo sapiens
(human)
Length = 84
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaa 69
|||||||||||||||||||| |||| ||||||| ||| |||||||
Sbjct: 76 tggtgcaaaagtaattgcgggttttgccattacttccaaaggcaaaa 30
>RF01061;mir-548;CABD01155376.1/1695-1778 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 46.1 bits (23), Expect = 1e-04
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
|||||||||||||| ||| || |||| |||||||| |||||| || ||||| ||||| |
Sbjct: 76 tggtgcaaaagtaactgcagtttttggcattacttttaatggcgaagactgcaattacct 17
Query: 82 ttgcacc 88
|||||||
Sbjct: 16 ttgcacc 10
>RF01061;mir-548;CABD01149968.2/8500-8417 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 46.1 bits (23), Expect = 1e-04
Identities = 61/73 (83%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
|||||||||||||| |||||| |||| |||| ||| |||| |||| || || |||||||
Sbjct: 76 tggtgcaaaagtaactgcggtttttggcattatttttaatgacaaacacagcaattactt 17
Query: 82 ttgcaccagccta 94
||| |||| ||||
Sbjct: 16 ttgyaccaaccta 4
>RF01061;mir-548;AANU01290519.1/8633-8716 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 46.1 bits (23), Expect = 1e-04
Identities = 54/63 (85%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgca-ttactt 81
||||||||||||||||| ||| || | |||||||| |||||| ||||| ||| ||||||
Sbjct: 9 tggtgcaaaagtaattgtggttttcgccattacttttaatggcgaaaaccgcagttactt 68
Query: 82 ttg 84
|||
Sbjct: 69 ttg 71
>RF01061;mir-548;AADB02016080.1/5738062-5737979 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 56/66 (84%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
|||||||||||||||||| || ||| |||||| |||||||| |||||| |||||||
Sbjct: 9 tggtgcaaaagtaattgcagttcttgccattactgctaatggcaagaactgcaattactt 68
Query: 82 ttgcac 87
||||||
Sbjct: 69 ttgcac 74
>RF01061;mir-548;AC117444.6/85961-86044 9606:Homo sapiens (human)
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttg 48
||||||||||||||||||||| ||||
Sbjct: 76 tggtgcaaaagtaattgcggtttttg 51
>RF01061;mir-548;AADD01036043.1/27192-27275 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 56/66 (84%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attactt 81
||||||||||||||||||||| || | | |||||| |||| |||||||| |||||||
Sbjct: 76 tggtgcaaaagtaattgcggttttggccactacttttaatgaacaaaactgcaattactt 17
Query: 82 ttgcac 87
||||||
Sbjct: 16 ttgcac 11
>RF01061;mir-548;CABD01089019.1/6160-6243 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 tggtgcaaaagtaattgcggtctttg 48
||||||||||||||||||||| ||||
Sbjct: 9 tggtgcaaaagtaattgcggtttttg 34
>RF01061;mir-548;CABD01201701.2/1726-1642 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 85
Score = 44.1 bits (22), Expect = 4e-04
Identities = 44/50 (88%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 23 tggtgcaaaagtaattgcggtcttt-gatattactttcaatggcaaaaac 71
|||||||| ||||||||| || ||| | |||||||||||||||||||||
Sbjct: 77 tggtgcaacagtaattgcagttttttgccattactttcaatggcaaaaac 28
>RF01061;mir-548;CABD01022860.2/18560-18643 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 26 tgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attacttttg 84
|||||||||||||| ||| |||| ||| || ||||||||||||||| ||| ||||||
Sbjct: 12 tgcaaaagtaattgtggtttttgtcattgattgtaatggcaaaaactgcaattgcttttg 71
Query: 85 caccagccta 94
||||| ||||
Sbjct: 72 caccaaccta 81
>RF01061;mir-548;AANU01112255.1/642-725 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 56/66 (84%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 24 ggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaactgc-attacttt 82
||||||||||| ||||||| |||| |||||||| |||| ||||||| | ||||||||
Sbjct: 75 ggtgcaaaagttattgcggcttttgccattacttttaatgtcaaaaaccacaattacttt 16
Query: 83 tgcacc 88
||||||
Sbjct: 15 tgcacc 10
