miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28841_hsa-mir-548k:mirbase
Length = 116
Score = 228 bits (115), Expect = 7e-61
Identities = 115/115 (100%)
Strand = Plus / Plus
Query: 1 ttttctcaagtattgctgttaggttggtgcaaaagtacttgcggattttgctttactttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ttttctcaagtattgctgttaggttggtgcaaaagtacttgcggattttgctttactttt 61
Query: 61 aatggcaaaaaccgcaattatttttgcttcaacctaatatgatgcaaaattggct 115
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aatggcaaaaaccgcaattatttttgcttcaacctaatatgatgcaaaattggct 116
>28839_hsa-mir-548i-4:mirbase
Length = 77
Score = 79.8 bits (40), Expect = 4e-16
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 21 aggttggtgcaaaagtacttgcggattttgctttacttttaatggcaaaaaccgcaatta 80
||||||||||||||||| ||||||||||||| ||||||||| |||||||||| ||| ||
Sbjct: 1 aggttggtgcaaaagtaattgcggattttgccatacttttaacggcaaaaaccacaaata 60
Query: 81 tttttgcttcaaccta 96
|| |||| |||||||
Sbjct: 61 ttattgcaccaaccta 76
>28811_hsa-mir-548aj-2:mirbase
Length = 92
Score = 77.8 bits (39), Expect = 2e-15
Identities = 73/83 (87%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttgct-ttacttttaatggcaaaaaccgcaa 77
||||||||||||||||||| |||| | ||||||| ||||||||||||| |||||| ||||
Sbjct: 7 ttaggttggtgcaaaagtaattgcagtttttgctattacttttaatggtaaaaactgcaa 66
Query: 78 ttatttttgcttcaacctaatat 100
||| |||| | |||||||||||
Sbjct: 67 ttacttttacaccaacctaatat 89
>28833_hsa-mir-548h-3:mirbase
Length = 118
Score = 75.8 bits (38), Expect = 6e-15
Identities = 72/82 (87%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 19 ttaggttggtgcaaaagtacttgcggattttgct-ttacttttaatggcaaaaaccgcaa 77
||||||||||||||||||| |||| | ||||||| ||||||| |||| |||||||||| |
Sbjct: 96 ttaggttggtgcaaaagtaattgcagtttttgctattactttcaatgacaaaaaccgcga 37
Query: 78 ttatttttgcttcaacctaata 99
||| |||||| ||||||||||
Sbjct: 36 ttacttttgcaccaacctaata 15
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttg 50
||||||||||||||||||| | |||| |||||
Sbjct: 17 ttaggttggtgcaaaagtaatcgcggtttttg 48
>30478_ptr-mir-548i-2:mirbase
Length = 148
Score = 71.9 bits (36), Expect = 1e-13
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 53 ttacttttaatggcaaaaaccgcaattatttttgcttcaacctaatatgatgcaaa 108
|||||||||||||||||| ||||||||| |||||| |||||||||| ||||||||
Sbjct: 71 ttacttttaatggcaaaatccgcaattacttttgcaccaacctaataggatgcaaa 16
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttgc 51
||||||||||||||||||| |||||||||||||
Sbjct: 27 ttaggttggtgcaaaagtaattgcggattttgc 59
>30480_ptr-mir-548i-4:mirbase
Length = 148
Score = 71.9 bits (36), Expect = 1e-13
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 53 ttacttttaatggcaaaaaccgcaattatttttgcttcaacctaatatgatgcaaa 108
|||||||||||||||||| ||||||||| |||||| |||||||||| ||||||||
Sbjct: 71 ttacttttaatggcaaaatccgcaattacttttgcaccaacctaataggatgcaaa 16
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttgc 51
||||||||||||||||||| |||||||||||||
Sbjct: 27 ttaggttggtgcaaaagtaattgcggattttgc 59
>30481_ptr-mir-548i-5:mirbase
Length = 148
Score = 71.9 bits (36), Expect = 1e-13
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 53 ttacttttaatggcaaaaaccgcaattatttttgcttcaacctaatatgatgcaaa 108
|||||||||||||||||| ||||||||| |||||| |||||||||| ||||||||
Sbjct: 70 ttacttttaatggcaaaatccgcaattacttttgcaccaacctaataggatgcaaa 15
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttgc 51
||||||||||||||||||| |||||||||||||
Sbjct: 26 ttaggttggtgcaaaagtaattgcggattttgc 58
>30482_ptr-mir-548i-6:mirbase
Length = 148
Score = 71.9 bits (36), Expect = 1e-13
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 53 ttacttttaatggcaaaaaccgcaattatttttgcttcaacctaatatgatgcaaa 108
|||||||||||||||||| ||||||||| |||||| |||||||||| ||||||||
Sbjct: 70 ttacttttaatggcaaaatccgcaattacttttgcaccaacctaataggatgcaaa 15
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttgc 51
||||||||||||||||||| |||||||||||||
Sbjct: 26 ttaggttggtgcaaaagtaattgcggattttgc 58
>28832_hsa-mir-548h-2:mirbase
Length = 88
Score = 69.9 bits (35), Expect = 4e-13
Identities = 72/83 (86%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttg-ctttacttttaatggcaaaaaccgcaa 77
||||||||||||||||||| | |||| ||||| | ||||||| ||||||||| ||| |||
Sbjct: 4 ttaggttggtgcaaaagtaatcgcggtttttgtcattactttcaatggcaaacaccacaa 63
Query: 78 ttatttttgcttcaacctaatat 100
||| |||||| |||||||||||
Sbjct: 64 ttacttttgcaccaacctaatat 86
>30479_ptr-mir-548i-3:mirbase
Length = 148
Score = 65.9 bits (33), Expect = 6e-12
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttg-ctttacttttaatggcaaaaaccgcaa 77
||||||||||||||||||| |||||||||||| | ||| ||||||||||||| ||||
Sbjct: 26 ttaggttggtgcaaaagtaattgcggattttgccattaaaagtaatggcaaaaacagcaa 85
Query: 78 ttatttttg 86
|||||||||
Sbjct: 86 ttatttttg 94
Score = 63.9 bits (32), Expect = 2e-11
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 53 ttacttttaatggcaaaaaccgcaattatttttgcttcaacctaatatgatgcaaa 108
|||||||||||||||||| ||||||||| |||||| |||||||| | ||||||||
Sbjct: 70 ttacttttaatggcaaaatccgcaattacttttgcaccaacctaagaggatgcaaa 15
>28836_hsa-mir-548i-1:mirbase
Length = 149
Score = 63.9 bits (32), Expect = 2e-11
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 53 ttacttttaatggcaaaaaccgcaattatttttgcttcaacctaatatgatgcaaa 108
|||||||||||||||||| ||||||||| |||||| |||||||||| | ||||||
Sbjct: 71 ttacttttaatggcaaaatccgcaattacttttgcaccaacctaatagggtgcaaa 16
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttgc 51
||||||||||||||||||| |||||||||||||
Sbjct: 27 ttaggttggtgcaaaagtaattgcggattttgc 59
>28837_hsa-mir-548i-2:mirbase
Length = 149
Score = 63.9 bits (32), Expect = 2e-11
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 53 ttacttttaatggcaaaaaccgcaattatttttgcttcaacctaatatgatgcaaa 108
|||||||||||||||||| ||||||||| |||||| ||| |||||| ||||||||
Sbjct: 71 ttacttttaatggcaaaatccgcaattacttttgcaccaaactaataggatgcaaa 16
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttgc 51
|||| |||||||||||||| |||||||||||||
Sbjct: 27 ttagtttggtgcaaaagtaattgcggattttgc 59
>28846_hsa-mir-548o-2:mirbase
Length = 70
Score = 61.9 bits (31), Expect = 9e-11
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 53 ttacttttaatggcaaaaaccgcaattatttttgc 87
|||||||||||||||||||||||||||| ||||||
Sbjct: 39 ttacttttaatggcaaaaaccgcaattacttttgc 5
>28002_mml-mir-548f:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttgc 51
||||||||||||||||||| |||||||||||||
Sbjct: 3 ttaggttggtgcaaaagtaattgcggattttgc 35
>28851_hsa-mir-548u:mirbase
Length = 81
Score = 58.0 bits (29), Expect = 1e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 46 ttttgctttacttttaatggcaaaaaccgcaattatttttgcttcaacctaat 98
|||| ||||||||||||||||||| || ||||||| |||||| |||||||||
Sbjct: 29 tttttctttacttttaatggcaaagactgcaattacttttgcgccaacctaat 81
>30470_ptr-mir-548a-1:mirbase
Length = 96
Score = 58.0 bits (29), Expect = 1e-09
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 24 ttggtgcaaaagtacttgcggattttg-ctttacttttaatggcaaaaaccgcaattatt 82
|||||||||||||| |||| ||||| | ||||||||||||||||||||| |||||| |
Sbjct: 86 ttggtgcaaaagtaattgccagttttgtcgttacttttaatggcaaaaaccacaattact 27
Query: 83 tttgc 87
|||||
Sbjct: 26 tttgc 22
>30477_ptr-mir-548i-1:mirbase
Length = 148
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttgc 51
||||||||||||||||||| |||||||||||||
Sbjct: 27 ttaggttggtgcaaaagtaattgcggattttgc 59
Score = 56.0 bits (28), Expect = 6e-09
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 53 ttacttttaatggcaaaaaccgcaattatttttgcttcaacctaatatgatgcaaa 108
|||| ||||||||||||| ||||||||| |||||| |||||||||| | ||||||
Sbjct: 71 ttacgtttaatggcaaaatccgcaattacttttgcaccaacctaatagggtgcaaa 16
>28800_hsa-mir-548aa-2:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 6e-09
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttgct-ttacttttaatggcaaaaaccgcaa 77
||||||||||||||||| | || || |||||| ||||||| ||||||||||||| |||
Sbjct: 6 ttaggttggtgcaaaagaaactgtggtttttgccattactttcaatggcaaaaaccacaa 65
Query: 78 ttatttttgcttcaacctaa 97
||| |||||| ||||||||
Sbjct: 66 ttacttttgcaccaacctaa 85
Score = 42.1 bits (21), Expect = 9e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 19 ttaggttggtgcaaaagtacttgcggattttgc 51
||||||||||||||||||| ||| || ||||||
Sbjct: 85 ttaggttggtgcaaaagtaattgtggtttttgc 53
>28818_hsa-mir-548c:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 60 taatggcaaaaaccgcaattatttttgcttcaacctaata 99
||||||||||||||||||||| |||||| ||||||||||
Sbjct: 50 taatggcaaaaaccgcaattacttttgcaccaacctaata 11
Score = 52.0 bits (26), Expect = 9e-08
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttg-ctttacttttaatggcaaaaaccgcaa 77
||||||||||||||||||| |||||| ||||| | ||||||| | | ||||||| | |||
Sbjct: 13 ttaggttggtgcaaaagtaattgcggtttttgccattactttcagtagcaaaaatctcaa 72
Query: 78 ttatttttgc 87
||| ||||||
Sbjct: 73 ttacttttgc 82
>28819_hsa-mir-548c:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 60 taatggcaaaaaccgcaattatttttgcttcaacctaata 99
||||||||||||||||||||| |||||| ||||||||||
Sbjct: 50 taatggcaaaaaccgcaattacttttgcaccaacctaata 11
Score = 52.0 bits (26), Expect = 9e-08
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttg-ctttacttttaatggcaaaaaccgcaa 77
||||||||||||||||||| |||||| ||||| | ||||||| | | ||||||| | |||
Sbjct: 13 ttaggttggtgcaaaagtaattgcggtttttgccattactttcagtagcaaaaatctcaa 72
Query: 78 ttatttttgc 87
||| ||||||
Sbjct: 73 ttacttttgc 82
>28822_hsa-mir-548d-2:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 6e-09
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 19 ttaggttggtgcaaaagtacttgcggattttgct-ttacttttaatggcaaaaaccgcaa 77
||||||||||||||||| | || || |||||| ||||||| ||||||||||||| |||
Sbjct: 92 ttaggttggtgcaaaagaaactgtggtttttgccattactttcaatggcaaaaaccacaa 33
Query: 78 ttatttttgcttcaacctaa 97
||| |||||| ||||||||
Sbjct: 32 ttacttttgcaccaacctaa 13
Score = 42.1 bits (21), Expect = 9e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttgc 51
||||||||||||||||||| ||| || ||||||
Sbjct: 13 ttaggttggtgcaaaagtaattgtggtttttgc 45
>28823_hsa-mir-548d-2:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 6e-09
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 19 ttaggttggtgcaaaagtacttgcggattttgct-ttacttttaatggcaaaaaccgcaa 77
||||||||||||||||| | || || |||||| ||||||| ||||||||||||| |||
Sbjct: 92 ttaggttggtgcaaaagaaactgtggtttttgccattactttcaatggcaaaaaccacaa 33
Query: 78 ttatttttgcttcaacctaa 97
||| |||||| ||||||||
Sbjct: 32 ttacttttgcaccaacctaa 13
Score = 42.1 bits (21), Expect = 9e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttgc 51
||||||||||||||||||| ||| || ||||||
Sbjct: 13 ttaggttggtgcaaaagtaattgtggtttttgc 45
>28826_hsa-mir-548f-2:mirbase
Length = 98
Score = 56.0 bits (28), Expect = 6e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 53 ttacttttaatggcaaaaaccgcaattatttttgcttcaacctaatat 100
|||||||||||||||||||| | ||||| |||||| |||||||||||
Sbjct: 45 ttacttttaatggcaaaaactgtaattacttttgcaccaacctaatat 92
>28838_hsa-mir-548i-3:mirbase
Length = 149
Score = 56.0 bits (28), Expect = 6e-09
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 53 ttacttttaatggcaaaaaccgcaattatttttgcttcaacctaatatgatg 104
|||||||||||||||||| ||||||||| |||||| ||||||||| ||||
Sbjct: 71 ttacttttaatggcaaaatccgcaattacttttgcacaaacctaataggatg 20
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttgc 51
||||||| ||||||||||| |||||||||||||
Sbjct: 27 ttaggtttgtgcaaaagtaattgcggattttgc 59
>28857_hsa-mir-548z:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 taatggcaaaaaccgcaattatttttgcttcaacctaata 99
||||||||||||||||||||| |||||| ||||||||||
Sbjct: 48 taatggcaaaaaccgcaattacttttgcaccaacctaata 87
Score = 52.0 bits (26), Expect = 9e-08
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 19 ttaggttggtgcaaaagtacttgcggattttg-ctttacttttaatggcaaaaaccgcaa 77
||||||||||||||||||| |||||| ||||| | ||||||| | | ||||||| | |||
Sbjct: 85 ttaggttggtgcaaaagtaattgcggtttttgccattactttcagtagcaaaaatctcaa 26
Query: 78 ttatttttgc 87
||| ||||||
Sbjct: 25 ttacttttgc 16
>30473_ptr-mir-548c:mirbase
Length = 96
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 60 taatggcaaaaaccgcaattatttttgcttcaacctaata 99
||||||||||||||||||||| |||||| ||||||||||
Sbjct: 50 taatggcaaaaaccgcaattacttttgcaccaacctaata 11
Score = 52.0 bits (26), Expect = 9e-08
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttg-ctttacttttaatggcaaaaaccgcaa 77
||||||||||||||||||| |||||| ||||| | ||||||| | | ||||||| | |||
Sbjct: 13 ttaggttggtgcaaaagtaattgcggtttttgccattactttcagtagcaaaaatctcaa 72
Query: 78 ttatttttgc 87
||| ||||||
Sbjct: 73 ttacttttgc 82
>28828_hsa-mir-548f-4:mirbase
Length = 105
Score = 54.0 bits (27), Expect = 2e-08
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 53 ttacttttaatggcaaaaaccgcaattatttttgcttcaacctaata 99
||||||||||||||||||||| | |||| |||||| ||||||||||
Sbjct: 58 ttacttttaatggcaaaaaccactattacttttgcaccaacctaata 12
>28831_hsa-mir-548h-1:mirbase
Length = 102
Score = 52.0 bits (26), Expect = 9e-08
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttg-ctttacttttaatggcaaaaaccgcaa 77
|||||| |||||||||||| | |||| ||||| | ||||||||||||| |||||| | ||
Sbjct: 9 ttaggtgggtgcaaaagtaatcgcggtttttgtcattacttttaatggtaaaaactggaa 68
Query: 78 ttatttttgc 87
||| ||||||
Sbjct: 69 ttacttttgc 78
>28843_hsa-mir-548m:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 69/82 (84%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 19 ttaggttggtgcaaaagtacttgcggattttgctttacttttaatggcaaaaaccgcaat 78
||||||||||||||| ||| ||| || |||||| |||| ||||||| |||||||| |||
Sbjct: 81 ttaggttggtgcaaaggtatttgtggcttttgcattac-tttaatgacaaaaaccacaaa 23
Query: 79 tatttttgcttcaacctaatat 100
|| ||||| |||||||||||
Sbjct: 22 tacctttgcaccaacctaatat 1
>28844_hsa-mir-548n:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 19 ttaggttggtgcaaaagtacttgcggattttgct 52
||||||||||||||||||| |||||| |||||||
Sbjct: 75 ttaggttggtgcaaaagtaattgcgggttttgct 42
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 21 aggttggtgcaaaagtacttgcggattttg 50
||||||||||||||||| ||| ||||||||
Sbjct: 1 aggttggtgcaaaagtaattgtggattttg 30
>30476_ptr-mir-548h:mirbase
Length = 101
Score = 52.0 bits (26), Expect = 9e-08
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttg-ctttacttttaatggcaaaaaccgcaa 77
|||||| |||||||||||| | |||| ||||| | ||||||||||||| |||||| | ||
Sbjct: 9 ttaggtgggtgcaaaagtaatcgcggtttttgtcattacttttaatggtaaaaactggaa 68
Query: 78 ttatttttgc 87
||| ||||||
Sbjct: 69 ttacttttgc 78
>28795_hsa-mir-548a-1:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 4e-07
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 24 ttggtgcaaaagtacttgcggattttg-ctttacttttaatggcaaaaaccgcaattatt 82
|||||||||||||| |||| ||||| | ||||||||||||||||||| | |||||| |
Sbjct: 87 ttggtgcaaaagtaattgccagttttgtcgttacttttaatggcaaaaatcacaattact 28
Query: 83 tttgc 87
|||||
Sbjct: 27 tttgc 23
>28802_hsa-mir-548ac:mirbase
Length = 88
Score = 50.1 bits (25), Expect = 4e-07
Identities = 62/72 (86%), Gaps = 3/72 (4%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttgc--tttacttttaatggcaaaaacc-gc 75
|||||||||||||||||| ||| || |||||| ||| ||||||||||||||||| ||
Sbjct: 4 ttaggttggtgcaaaagttattgtggtttttgctatttttttttaatggcaaaaaccggc 63
Query: 76 aattatttttgc 87
||||| ||||||
Sbjct: 64 aattacttttgc 75
>28815_hsa-mir-548an:mirbase
Length = 83
Score = 50.1 bits (25), Expect = 4e-07
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 19 ttaggttggtgcaaaagtacttgcggattttg-ctttacttttaatggcaaaaaccgcaa 77
||||||||||||||||| | |||||| ||||| | ||||||||| |||||||||| |||
Sbjct: 82 ttaggttggtgcaaaaggaattgcggtttttgccattacttttataggcaaaaaccacaa 23
Query: 78 t 78
|
Sbjct: 22 t 22
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 60 taatggcaaaaaccgcaattatttttgcttcaacctaat 98
|||||||||||||||||||| |||||| |||||||||
Sbjct: 45 taatggcaaaaaccgcaattccttttgcaccaacctaat 83
>28834_hsa-mir-548h-4:mirbase
Length = 111
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 59 ttaatggcaaaaaccgcaattatttttgcttcaacctaata 99
|||||| ||||||||||||||| |||||| ||||||||||
Sbjct: 64 ttaatgacaaaaaccgcaattacttttgcaccaacctaata 104
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 19 ttaggttggtgcaaaagtacttgcggattttg 50
||||||||||||||||||| |||||| |||||
Sbjct: 102 ttaggttggtgcaaaagtaattgcggtttttg 71
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttg 50
||||||||||||||||||| | |||| |||||
Sbjct: 5 ttaggttggtgcaaaagtaatcgcggtttttg 36
>28799_hsa-mir-548aa-1:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 53 ttacttttaatggcaaaaaccgcaattatttttgcttcaacctaatat 100
||||||||| |||||||||| |||||| |||||| |||||||||||
Sbjct: 41 ttacttttacaggcaaaaaccacaattacttttgcaccaacctaatat 88
Score = 42.1 bits (21), Expect = 9e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 19 ttaggttggtgcaaaagtacttgcggattttgc 51
||||||||||||||||||| ||| || ||||||
Sbjct: 85 ttaggttggtgcaaaagtaattgtggtttttgc 53
>28820_hsa-mir-548d-1:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 53 ttacttttaatggcaaaaaccgcaattatttttgcttcaacctaatat 100
||||||||| |||||||||| |||||| |||||| |||||||||||
Sbjct: 57 ttacttttacaggcaaaaaccacaattacttttgcaccaacctaatat 10
Score = 42.1 bits (21), Expect = 9e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttgc 51
||||||||||||||||||| ||| || ||||||
Sbjct: 13 ttaggttggtgcaaaagtaattgtggtttttgc 45
>28821_hsa-mir-548d-1:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 53 ttacttttaatggcaaaaaccgcaattatttttgcttcaacctaatat 100
||||||||| |||||||||| |||||| |||||| |||||||||||
Sbjct: 57 ttacttttacaggcaaaaaccacaattacttttgcaccaacctaatat 10
Score = 42.1 bits (21), Expect = 9e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttgc 51
||||||||||||||||||| ||| || ||||||
Sbjct: 13 ttaggttggtgcaaaagtaattgtggtttttgc 45
>28842_hsa-mir-548l:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttg 50
||||||||||||||||||| |||||| |||||
Sbjct: 3 ttaggttggtgcaaaagtatttgcgggttttg 34
>28849_hsa-mir-548s:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 60 taatggcaaaaaccgcaattatttttgc 87
||||||||||||| ||||||||||||||
Sbjct: 33 taatggcaaaaactgcaattatttttgc 6
>28854_hsa-mir-548x:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 21 aggttggtgcaaaagtacttgcggattttgctttacttttaatggcaaaaaccgcaatta 80
||||| ||||||||||| |||| | |||||| ||||||| ||| | |||||| |||||||
Sbjct: 1 aggttagtgcaaaagtaattgcagtttttgcgttactttcaatcgtaaaaactgcaatta 60
>28855_hsa-mir-548x-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 53 ttacttttaatggcaaaaaccgcaattatttttgcttcaacctaatat 100
|||||||||||||||||| || |||||| ||||| |||||||||||
Sbjct: 55 ttacttttaatggcaaaagccacaattacttttgtgccaacctaatat 8
>30485_ptr-mir-548l:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttg 50
||||||||||||||||||| |||||| |||||
Sbjct: 3 ttaggttggtgcaaaagtatttgcgggttttg 34
>30486_ptr-mir-548n:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 64/76 (84%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 20 taggttggtgcaaaagtacttgcggattttgctttacttttaatggcaaaaaccgcaatt 79
|||||||||||||||||| ||| || ||||||| | |||||| | ||||| || |||||
Sbjct: 75 taggttggtgcaaaagtaattgggggttttgctat-tttttaacgacaaaatccacaatt 17
Query: 80 atttttgcttcaacct 95
| |||||| |||||||
Sbjct: 16 acttttgcatcaacct 1
>27998_mml-mir-548c:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 6e-06
Identities = 42/47 (89%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 54 tacttttaatggcaaaaa-ccgcaattatttttgcttcaacctaata 99
||||||||||| |||||| || |||||| |||||| |||||||||||
Sbjct: 54 tacttttaatgacaaaaaaccccaattacttttgcatcaacctaata 8
>28803_hsa-mir-548ad:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 16 ctgttaggttggtgcaaaagtacttgcggattttg 50
|||||||||||||||||||||| ||| || |||||
Sbjct: 1 ctgttaggttggtgcaaaagtaattgtggtttttg 35
>28813_hsa-mir-548al:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 57 ttttaatggcaaaaaccgcaattatttttgc 87
|||||||||||||||| ||||||| ||||||
Sbjct: 38 ttttaatggcaaaaacagcaattacttttgc 8
>27997_mml-mir-548b:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 53/62 (85%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttg-ctttacttttaatggcaaaaaccgcaa 77
||||||||||||||||||| ||| || || | ||||| ||| ||||||||||||| |||
Sbjct: 13 ttaggttggtgcaaaagtaattggggcttgggcctttattttcaatggcaaaaacctcaa 72
Query: 78 tt 79
||
Sbjct: 73 tt 74
>27999_mml-mir-548d:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 68/82 (82%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 19 ttaggttggtgcaaaagtacttgcggattttg-ctttacttttaatggcaaaaaccgcaa 77
|||| |||||||||||| | ||| || ||||| | ||||||||| ||||| |||| |||
Sbjct: 92 ttagtttggtgcaaaagaaattgtggtttttgccattacttttataggcaagaaccacaa 33
Query: 78 ttatttttgcttcaacctaata 99
||| |||||| ||||||||||
Sbjct: 32 ttacttttgcaccaacctaata 11
>28000_mml-mir-548d:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 68/82 (82%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 19 ttaggttggtgcaaaagtacttgcggattttg-ctttacttttaatggcaaaaaccgcaa 77
|||| |||||||||||| | ||| || ||||| | ||||||||| ||||| |||| |||
Sbjct: 92 ttagtttggtgcaaaagaaattgtggtttttgccattacttttataggcaagaaccacaa 33
Query: 78 ttatttttgcttcaacctaata 99
||| |||||| ||||||||||
Sbjct: 32 ttacttttgcaccaacctaata 11
>28801_hsa-mir-548ab:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 23 gttggtgcaaaagtacttgcggattttgct 52
||||||||||||||| ||| ||||||||||
Sbjct: 3 gttggtgcaaaagtaattgtggattttgct 32
>30471_ptr-mir-548a-2:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 19 ttaggttggtgcaaaagtacttgcggattttg-ctttacttttaatggcaaaaa 71
|||| |||||||||||||| |||| ||||| | |||||||||||||||||||
Sbjct: 91 ttagtttggtgcaaaagtaattgccagttttgtcattacttttaatggcaaaaa 38
>30509_ptr-mir-570:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 62 atggcaaaaaccgcaattatttttgcttcaacctaata 99
||||||||||| ||||||| ||||| |||||||||||
Sbjct: 39 atggcaaaaacggcaattacctttgcatcaacctaata 2
>28001_mml-mir-548e:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 9e-05
Identities = 58/69 (84%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 20 taggttggtgcaaaagtacttgcg-gattttgctttacttttaatggcaaaaaccgcaat 78
|||||||||||||||||| ||||| | ||| | ||||||| |||||||||| | ||| |
Sbjct: 14 taggttggtgcaaaagtaattgcgagttttaccattactttcaatggcaaaaccggcagt 73
Query: 79 tatttttgc 87
|| ||||||
Sbjct: 74 tacttttgc 82
>28019_mml-mir-570:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 9e-05
Identities = 46/53 (86%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 19 ttaggttggtgcaaaagtacttgcggattttg-ctttacttttaatggcaaaa 70
||||||||||||||| ||| |||| | ||||| | |||||||||| |||||||
Sbjct: 3 ttaggttggtgcaaacgtaattgcagtttttgccattacttttaaaggcaaaa 55
Score = 40.1 bits (20), Expect = 3e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 60 taatggcaaaaaccgcaattatttttgcttcaacctaata 99
||||||||||||| ||||||| ||||| ||||||||||
Sbjct: 40 taatggcaaaaactgcaattacgtttgcaccaacctaata 1
>28814_hsa-mir-548am:mirbase
Length = 74
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 23 gttggtgcaaaagtacttgcggattttgc 51
||||||||||||||| |||||| ||||||
Sbjct: 2 gttggtgcaaaagtaattgcggtttttgc 30
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 64 ggcaaaaaccgcaattatttttgc 87
||||||||||||||||| ||||||
Sbjct: 31 ggcaaaaaccgcaattacttttgc 8
>28848_hsa-mir-548q:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 60 taatggcaaaaaccgcaattatttttgcttcaacctaatat 100
|||||||||||||||| |||| |||||| || ||||||||
Sbjct: 41 taatggcaaaaaccgccattacttttgcaccagcctaatat 1
>30483_ptr-mir-548j:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 9e-05
Identities = 43/49 (87%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 25 tggtgcaaaagtacttgcggattttgct-ttacttttaatggcaaaaac 72
||||||||||||| |||||| |||| | ||||||| ||||||||||||
Sbjct: 23 tggtgcaaaagtaattgcggtctttgatattactttcaatggcaaaaac 71
>27996_mml-mir-548a:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 33/36 (91%), Gaps = 1/36 (2%)
Strand = Plus / Minus
Query: 53 ttacttttaatggca-aaaaccgcaattatttttgc 87
||||||||||||||| |||||| |||||| ||||||
Sbjct: 58 ttacttttaatggcaaaaaaccacaattacttttgc 23
