miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01061;mir-548;AC068058.12/13722-13805 9606:Homo sapiens (human)
Length = 84
Score = 67.9 bits (34), Expect = 2e-11
Identities = 67/77 (87%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 1 aggttgatgcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaatt 58
|||||| ||| |||||||| |||| ||||| | |||||| ||| ||||||||| |||||
Sbjct: 5 aggttggtgcgaaagtaatggtgggttttgcctttaaaactaatggcaaaacccacaatt 64
Query: 59 acttttgcaccaaccta 75
|||||||||||||||||
Sbjct: 65 acttttgcaccaaccta 81
Score = 44.1 bits (22), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1 aggttgatgcaaaagtaattgtggattttg 30
|||||| ||||||||||||||||| |||||
Sbjct: 80 aggttggtgcaaaagtaattgtgggttttg 51
>RF01061;mir-548;AADD01165731.1/6332-6415 9606:Homo sapiens
(human)
Length = 84
Score = 67.9 bits (34), Expect = 2e-11
Identities = 67/77 (87%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 1 aggttgatgcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaatt 58
||||| |||||||||||||||||| ||||| | |||||| ||| ||| || || |||||
Sbjct: 80 aggttaatgcaaaagtaattgtggcttttgccattaaaagcaatggcagaaaccacaatt 21
Query: 59 acttttgcaccaaccta 75
|||||||||||||||||
Sbjct: 20 acttttgcaccaaccta 4
>RF01061;mir-548;AADC01102129.1/13137-13054 9606:Homo sapiens
(human)
Length = 84
Score = 67.9 bits (34), Expect = 2e-11
Identities = 67/77 (87%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 1 aggttgatgcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaatt 58
|||||| || |||||||||||||| ||||||| || ||| ||| |||||| || |||||
Sbjct: 5 aggttggtgaaaaagtaattgtggcttttgtcattgaaagtaatggcaaaaaccgcaatt 64
Query: 59 acttttgcaccaaccta 75
|||||||||||||||||
Sbjct: 65 acttttgcaccaaccta 81
>RF01061;mir-548;AACZ02117558.1/10764-10847 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 60.0 bits (30), Expect = 4e-09
Identities = 66/77 (85%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 1 aggttgatgcaaaagtaattgtggattttgtcgtt--aaaaaatagcaaaacccccaatt 58
|||||| |||||| |||||||||||||||||| || ||| ||| |||||||| | |||
Sbjct: 5 aggttggtgcaaatgtaattgtggattttgtcattgaaaataatggcaaaacctgccatt 64
Query: 59 acttttgcaccaaccta 75
|| ||||||||||||||
Sbjct: 65 acatttgcaccaaccta 81
>RF01061;mir-548;AADC01022461.1/57990-57907 9606:Homo sapiens
(human)
Length = 84
Score = 60.0 bits (30), Expect = 4e-09
Identities = 66/77 (85%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 1 aggttgatgcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaatt 58
|||||| |||||||| |||||||| ||||| | || || ||| ||||||||| |||||
Sbjct: 5 aggttggtgcaaaaggaattgtgggttttgcctttggaagtaatggcaaaacccgcaatt 64
Query: 59 acttttgcaccaaccta 75
|||||||||||||||||
Sbjct: 65 acttttgcaccaaccta 81
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 gcaaaacccccaattacttttgcaccaaccta 75
||||||||| ||||| ||||||||||||||||
Sbjct: 35 gcaaaacccacaattccttttgcaccaaccta 4
>RF01061;mir-548;CABD01195132.2/4219-4302 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 60.0 bits (30), Expect = 4e-09
Identities = 66/77 (85%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 1 aggttgatgcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaatt 58
|||||| ||||||||||| ||||| ||||| | || ||| |||||||||||| |||||
Sbjct: 5 aggttgctgcaaaagtaactgtgggttttgccattgaaagtaatagcaaaacctgcaatt 64
Query: 59 acttttgcaccaaccta 75
||||||||| |||||||
Sbjct: 65 acttttgcagcaaccta 81
>RF01061;mir-548;AANU01296214.1/2804-2721 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 60.0 bits (30), Expect = 4e-09
Identities = 63/73 (86%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 5 tgatgcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaattactt 62
||||||||||||||||| | ||||| | |||||| ||| |||||||| |||||||||
Sbjct: 76 tgatgcaaaagtaattgcagtttttgccattaaaagtaatgtcaaaacccgcaattactt 17
Query: 63 ttgcaccaaccta 75
|||||||||||||
Sbjct: 16 ttgcaccaaccta 4
>RF01061;mir-548;AANU01261834.1/7167-7084 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 60.0 bits (30), Expect = 4e-09
Identities = 66/77 (85%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 1 aggttgatgcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaatt 58
|||||| ||||||||||||||||| || |||| |||||| | | |||||| || ||| |
Sbjct: 5 aggttggtgcaaaagtaattgtggtttgtgtctttaaaagtagtggcaaaaaccgcaact 64
Query: 59 acttttgcaccaaccta 75
|||||||||||||||||
Sbjct: 65 acttttgcaccaaccta 81
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 54 caattacttttgcaccaaccta 75
||||||||||||||||||||||
Sbjct: 25 caattacttttgcaccaaccta 4
>RF01061;mir-548;AC074323.4/95680-95597 9606:Homo sapiens (human)
Length = 84
Score = 58.0 bits (29), Expect = 2e-08
Identities = 59/68 (86%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 8 tgcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaattacttttg 65
|||||||||||||| || ||||| | |||||| ||| |||||| || ||||||||||||
Sbjct: 12 tgcaaaagtaattgcggtttttgccattaaaagtaatggcaaaaaccgcaattacttttg 71
Query: 66 caccaacc 73
||||||||
Sbjct: 72 caccaacc 79
>RF01061;mir-548;AACZ02147953.1/7033-7116 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 56.0 bits (28), Expect = 6e-08
Identities = 64/75 (85%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 1 aggttgatgcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaatt 58
|||||| ||||||||||||||||| ||||| | || ||| ||||| |||| || ||||
Sbjct: 5 aggttggtgcaaaagtaattgtggtttttgccattgaaagtaatagtaaaagccataatt 64
Query: 59 acttttgcaccaacc 73
|||||||||||||||
Sbjct: 65 acttttgcaccaacc 79
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 gcaaaacccccaattacttttgcaccaaccta 75
|||||| || ||||||||||||||||||||||
Sbjct: 35 gcaaaaaccacaattacttttgcaccaaccta 4
>RF01061;mir-548;ABSL01029623.1/494-577 9606:Homo sapiens (human)
Length = 84
Score = 56.0 bits (28), Expect = 6e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 40 aatagcaaaacccccaattacttttgcaccaaccta 75
|||||||||| || ||||||||||||||||||||||
Sbjct: 39 aatagcaaaaaccgcaattacttttgcaccaaccta 4
>RF01061;mir-548;CABD01007255.1/6013-6096 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 56.0 bits (28), Expect = 6e-08
Identities = 58/67 (86%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 8 tgcaaaagtaattgtggattttgtcgttaaaaa--atagcaaaacccccaattacttttg 65
||||||||||||||||| ||||| | ||||| | ||||||||| || |||||||||||
Sbjct: 12 tgcaaaagtaattgtggtttttgccattaaatataatagcaaaaaccgtaattacttttg 71
Query: 66 caccaac 72
|||||||
Sbjct: 72 caccaac 78
>RF01061;mir-548;AADC01117423.1/979850-979767 9606:Homo sapiens
(human)
Length = 84
Score = 54.0 bits (27), Expect = 2e-07
Identities = 63/74 (85%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 2 ggttgatgcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaatta 59
||||| |||||||||||||| || ||||| | |||||| ||| |||||| || ||||||
Sbjct: 6 ggttggtgcaaaagtaattgcggtttttgccattaaaagtaattgcaaaaaccacaatta 65
Query: 60 cttttgcaccaacc 73
||||| ||||||||
Sbjct: 66 cttttacaccaacc 79
Score = 44.1 bits (22), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 44 gcaaaacccccaattacttttgcaccaacc 73
|||||| || ||||||||||||||||||||
Sbjct: 35 gcaaaaaccgcaattacttttgcaccaacc 6
>RF01061;mir-548;AADC01126060.1/253363-253446 9606:Homo sapiens
(human)
Length = 84
Score = 54.0 bits (27), Expect = 2e-07
Identities = 60/70 (85%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 8 tgcaaaagtaattgtggattttgtcgttaaaaa--atagcaaaacccccaattacttttg 65
|||||||||||||| || ||||| | ||||||| || |||||| || ||||||||||||
Sbjct: 12 tgcaaaagtaattgcggtttttgccattaaaaacaatggcaaaaaccgcaattacttttg 71
Query: 66 caccaaccta 75
||||| ||||
Sbjct: 72 caccagccta 81
>RF01061;mir-548;AANU01112255.1/642-725 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 54.0 bits (27), Expect = 2e-07
Identities = 60/70 (85%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 8 tgcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaattacttttg 65
||||||||||||||||| ||||| | |||||| ||| |||||| || |||| |||||||
Sbjct: 12 tgcaaaagtaattgtggtttttgacattaaaagtaatggcaaaagccgcaataacttttg 71
Query: 66 caccaaccta 75
|||| |||||
Sbjct: 72 caccgaccta 81
>RF01061;mir-548;AC202678.6/146907-146824 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 54.0 bits (27), Expect = 2e-07
Identities = 63/74 (85%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 1 aggttgatgcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaatt 58
|||||| |||||||||||||| || ||||||| || ||| ||| ||||| || |||||
Sbjct: 5 aggttggtgcaaaagtaattgcggtttttgtcattgaaagtaatggcaaagaccgcaatt 64
Query: 59 acttttgcaccaac 72
||||||||||||||
Sbjct: 65 acttttgcaccaac 78
Score = 44.1 bits (22), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 45 caaaacccccaattacttttgcaccaacct 74
||||| || |||||||||||||||||||||
Sbjct: 34 caaaaaccgcaattacttttgcaccaacct 5
>RF01061;mir-548;AC111199.4/17434-17350 9606:Homo sapiens (human)
Length = 85
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 aggttgatgcaaaagtaattgtggattttg 30
|||||||||||||||||||||||| |||||
Sbjct: 5 aggttgatgcaaaagtaattgtggtttttg 34
Score = 44.1 bits (22), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1 aggttgatgcaaaagtaattgtggattttg 30
||||||||||||||||||||| || |||||
Sbjct: 80 aggttgatgcaaaagtaattgcggtttttg 51
>RF01061;mir-548;CABD01378151.1/10643-10726 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 65/77 (84%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 1 aggttgatgcaaaagtaattgtggattttgtcgttaaaaaata--gcaaaacccccaatt 58
|||||| |||||||| |||||||||||||| | || ||| || |||||| | |||||
Sbjct: 5 aggttggtgcaaaagaaattgtggattttgccattgaaagttacggcaaaaatcacaatt 64
Query: 59 acttttgcaccaaccta 75
|||||||||||||||||
Sbjct: 65 acttttgcaccaaccta 81
>RF01061;mir-548;AANU01285209.1/57947-57864 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 65/77 (84%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 1 aggttgatgcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaatt 58
|||||| ||||||||| || |||| ||||| | |||||| ||| ||||| || |||||
Sbjct: 5 aggttggtgcaaaagttatcgtggtttttgccattaaaagtaatgacaaaaaccgcaatt 64
Query: 59 acttttgcaccaaccta 75
|||||||||||||||||
Sbjct: 65 acttttgcaccaaccta 81
>RF01061;mir-548;AANU01113788.1/5460-5543 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 65/77 (84%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 1 aggttgatgcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaatt 58
||||||||||||||| |||||||| ||||| | |||||| ||||||||| | || ||
Sbjct: 5 aggttgatgcaaaagcaattgtggtttttgccattaaaagtgatagcaaaaacttcagtt 64
Query: 59 acttttgcaccaaccta 75
||||||||||||||||
Sbjct: 65 gcttttgcaccaaccta 81
>RF01061;mir-548;ABBV01001495.1/1250-1333 447454:candidate
division TM7 single-cell isolate TM7a
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 65/77 (84%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 1 aggttgatgcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaatt 58
|||||| |||| ||||||||| | ||||| | |||||| ||| ||||||||| |||||
Sbjct: 5 aggttggtgcataagtaattgcagtttttgccattaaaagtaatggcaaaacccgcaatt 64
Query: 59 acttttgcaccaaccta 75
|||| ||||||||||||
Sbjct: 65 acttgtgcaccaaccta 81
>RF00015;U4;AAPY01611593.1/548-750 37347:Tupaia belangeri (northern
tree shrew)
Length = 203
Score = 50.1 bits (25), Expect = 4e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 47 aaacccccaattacttttgcaccaaccta 75
|||||| ||||||||||||||||||||||
Sbjct: 75 aaacccacaattacttttgcaccaaccta 103
>RF01061;mir-548;ABGA01014573.1/16804-16721 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 44 gcaaaacccccaattacttttgcaccaa 71
||||||||| ||||||||||||||||||
Sbjct: 35 gcaaaacccacaattacttttgcaccaa 8
Score = 44.1 bits (22), Expect = 2e-04
Identities = 55/65 (84%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 8 tgcaaaagtaattgtggattttgtcgtt--aaaaaatagcaaaacccccaattacttttg 65
||||||||||||||||| ||||| | || || |||| ||||||| | ||||| ||||||
Sbjct: 12 tgcaaaagtaattgtgggttttgccattgaaagaaatggcaaaactcacaattgcttttg 71
Query: 66 cacca 70
|||||
Sbjct: 72 cacca 76
>RF01061;mir-548;ABGA01354861.1/8138-8055 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 gcaaaacccccaattacttttgcaccaaccta 75
|||||| || ||||||||||||||||||||||
Sbjct: 35 gcaaaaaccacaattacttttgcaccaaccta 4
Score = 44.1 bits (22), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 aggttgatgcaaaagtaattgtggattttg 30
|||||| ||||||||||||||||| |||||
Sbjct: 5 aggttggtgcaaaagtaattgtggtttttg 34
>RF01061;mir-548;AADB02001154.1/69220-69137 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 gcaaaacccccaattacttttgcaccaaccta 75
||||||||| | ||||||||||||||||||||
Sbjct: 35 gcaaaacccgccattacttttgcaccaaccta 4
Score = 44.1 bits (22), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 46 aaaacccccaattacttttgcaccaaccta 75
||||||| | ||||||||||||||||||||
Sbjct: 53 aaaacccgccattacttttgcaccaaccta 82
>RF01061;mir-548;ABSL01062835.1/19063-18980 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 gcaaaacccccaattacttttgcaccaaccta 75
|||||| || ||||||||||||||||||||||
Sbjct: 35 gcaaaaaccacaattacttttgcaccaaccta 4
Score = 44.1 bits (22), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 aggttgatgcaaaagtaattgtggattttg 30
|||||| ||||||||||||||||| |||||
Sbjct: 5 aggttggtgcaaaagtaattgtggtttttg 34
>RF01061;mir-548;AADB02016093.1/179805-179888 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 gcaaaacccccaattacttttgcaccaaccta 75
||||||||| | ||||||||||||||||||||
Sbjct: 35 gcaaaacccgcgattacttttgcaccaaccta 4
>RF01061;mir-548;AC117444.6/85961-86044 9606:Homo sapiens (human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 44 gcaaaacccccaattacttttgcaccaaccta 75
|||||| || ||||||||||||||||||||||
Sbjct: 50 gcaaaaaccgcaattacttttgcaccaaccta 81
>RF01061;mir-548;CABD01001244.1/12488-12571 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 gcaaaacccccaattacttttgcaccaaccta 75
|||||| || ||||||||||||||||||||||
Sbjct: 35 gcaaaatccgcaattacttttgcaccaaccta 4
Score = 46.1 bits (23), Expect = 6e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1 aggttgatgcaaaagtaattgtggattttgtcgttaaaa 39
|||||| |||||||||||||| |||||||| | ||||||
Sbjct: 5 aggttggtgcaaaagtaattgcggattttgccattaaaa 43
>RF01061;mir-548;CABD01089019.1/6160-6243 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 gcaaaacccccaattacttttgcaccaaccta 75
|||||| || ||||||||||||||||||||||
Sbjct: 35 gcaaaaaccgcaattacttttgcaccaaccta 4
>RF01061;mir-548;CABD01524054.2/315-398 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 40 aatagcaaaacccccaattacttttgcaccaaccta 75
|||||||||| || |||||||||||||| |||||||
Sbjct: 39 aatagcaaaaaccgcaattacttttgcaacaaccta 4
>RF01061;mir-548;CABD01343912.1/1154-1071 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 gcaaaacccccaattacttttgcaccaaccta 75
|||||| || ||||||||||||||||||||||
Sbjct: 35 gcaaaaaccgcaattacttttgcaccaaccta 4
>RF01061;mir-548;CABD01022860.2/18560-18643 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 aggttgatgcaaaagtaattgtggattttgtc 32
|||||| ||||||||||||||||| |||||||
Sbjct: 5 aggttgctgcaaaagtaattgtggtttttgtc 36
>RF01061;mir-548;AANU01255888.1/15264-15181 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 57/67 (85%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 8 tgcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaattacttttg 65
||||||||||||||||| ||||| | |||||| | | |||||| || || |||||||||
Sbjct: 12 tgcaaaagtaattgtggtttttgccattaaaagtactggcaaaagccacagttacttttg 71
Query: 66 caccaac 72
|||||||
Sbjct: 72 caccaac 78
>RF01061;mir-548;AANU01170885.1/1-85 9544:Macaca mulatta (rhesus
monkey)
Length = 85
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 gcaaaacccccaattacttttgcaccaaccta 75
|||||| || ||||||||||||||||||||||
Sbjct: 35 gcaaaaaccgcaattacttttgcaccaaccta 4
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1 aggttgatgcaaaagtaattg 21
|||||||||||||||||||||
Sbjct: 81 aggttgatgcaaaagtaattg 61
>RF01061;mir-548;AANU01115116.1/14393-14310 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 gcaaaacccccaattacttttgcaccaaccta 75
|||||||| ||||||||||||||||||||||
Sbjct: 35 gcaaaacctgcaattacttttgcaccaaccta 4
>RF01061;mir-548;ABGA01227794.1/7074-6991 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 46.1 bits (23), Expect = 6e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 44 gcaaaacccccaattacttttgcaccaacct 74
|||||| || |||||||||||||||||||||
Sbjct: 35 gcaaaaaccgcaattacttttgcaccaacct 5
>RF01061;mir-548;AC104441.2/115021-115102 9606:Homo sapiens
(human)
Length = 82
Score = 46.1 bits (23), Expect = 6e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 41 atagcaaaacccccaattacttttgcaccaaccta 75
||||||||| || ||||||||| ||||||||||||
Sbjct: 38 atagcaaaaaccgcaattacttctgcaccaaccta 4
>RF01061;mir-548;AC003681.1/24588-24671 9606:Homo sapiens (human)
Length = 84
Score = 46.1 bits (23), Expect = 6e-05
Identities = 56/66 (84%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 8 tgcaaaagtaattgtggattttgtcgttaaaaa--atagcaaaacccccaattacttttg 65
||||||||||||||||| ||||| | ||||||| || |||||| | |||||||||||
Sbjct: 12 tgcaaaagtaattgtggtttttgccattaaaaatgatggcaaaaactgtaattacttttg 71
Query: 66 caccaa 71
||||||
Sbjct: 72 caccaa 77
>RF01061;mir-548;AADB02036895.1/103995-104076 9606:Homo sapiens
(human)
Length = 82
Score = 46.1 bits (23), Expect = 6e-05
Identities = 62/75 (82%)
Strand = Plus / Plus
Query: 1 aggttgatgcaaaagtaattgtggattttgtcgttaaaaaatagcaaaacccccaattac 60
|||||| |||||| ||| |||||| ||||||| ||||| | |||||| || ||| |||
Sbjct: 5 aggttggtgcaaaggtatttgtggtttttgtcattaaagtaatgcaaaagccacaaatac 64
Query: 61 ttttgcaccaaccta 75
||||||||||||||
Sbjct: 65 ctttgcaccaaccta 79
>RF01061;mir-548;CABD01386540.1/401-318 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 46.1 bits (23), Expect = 6e-05
Identities = 59/70 (84%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 8 tgcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaattacttttg 65
||||||||||||||| ||||| | |||||| ||| |||||| | ||||||||||||
Sbjct: 12 tgcaaaagtaattgtaatttttgccattaaaagcaatggcaaaagctgcaattacttttg 71
Query: 66 caccaaccta 75
||||||||||
Sbjct: 72 caccaaccta 81
>RF01061;mir-548;ABGA01258901.1/11428-11345 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 caattacttttgcaccaaccta 75
||||||||||||||||||||||
Sbjct: 60 caattacttttgcaccaaccta 81
>RF01061;mir-548;ABGA01209240.1/4651-4734 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 caattacttttgcaccaaccta 75
||||||||||||||||||||||
Sbjct: 60 caattacttttgcaccaaccta 81
>RF01061;mir-548;AACZ02123200.1/20871-20786 9598:Pan troglodytes
(chimpanzee)
Length = 86
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 caattacttttgcaccaaccta 75
||||||||||||||||||||||
Sbjct: 62 caattacttttgcaccaaccta 83
>RF01061;mir-548;AACZ02112099.1/25061-25144 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 54 caattacttttgcaccaaccta 75
||||||||||||||||||||||
Sbjct: 25 caattacttttgcaccaaccta 4
>RF01061;mir-548;AC191392.1/146896-146813 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 64/77 (83%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 1 aggttgatgcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaatt 58
|||||| ||| ||||||| ||||| ||||| | |||||| ||| ||| |||| |||||
Sbjct: 5 aggttggtgccaaagtaactgtgggttttgccattaaaagtaatgacaagacccacaatt 64
Query: 59 acttttgcaccaaccta 75
||||| |||||||||||
Sbjct: 65 actttggcaccaaccta 81
>RF01061;mir-548;AL008721.1/97595-97678 9606:Homo sapiens (human)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 54 caattacttttgcaccaaccta 75
||||||||||||||||||||||
Sbjct: 25 caattacttttgcaccaaccta 4
>RF01061;mir-548;ABBA01068880.1/357-274 9606:Homo sapiens (human)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 54 caattacttttgcaccaaccta 75
||||||||||||||||||||||
Sbjct: 25 caattacttttgcaccaaccta 4
>RF01061;mir-548;AADB02011926.1/1109567-1109484 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 54 caattacttttgcaccaaccta 75
||||||||||||||||||||||
Sbjct: 25 caattacttttgcaccaaccta 4
>RF01061;mir-548;AADC01054028.1/147-64 9606:Homo sapiens (human)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 54 caattacttttgcaccaaccta 75
||||||||||||||||||||||
Sbjct: 25 caattacttttgcaccaaccta 4
>RF01061;mir-548;AADB02010442.1/1775967-1775884 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 64/77 (83%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 1 aggttgatgcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaatt 58
|||||| |||||||||||||| || ||||| | || ||| ||| ||||| || |||||
Sbjct: 5 aggttgttgcaaaagtaattgcggtttttgccattcaaagcaatgacaaaaaccgcaatt 64
Query: 59 acttttgcaccaaccta 75
||||||||| |||||||
Sbjct: 65 acttttgcaacaaccta 81
>RF01061;mir-548;AADC01144176.1/293955-294038 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 54 caattacttttgcaccaaccta 75
||||||||||||||||||||||
Sbjct: 25 caattacttttgcaccaaccta 4
>RF01061;mir-548;AADB02016080.1/5738062-5737979 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 54 caattacttttgcaccaaccta 75
||||||||||||||||||||||
Sbjct: 25 caattacttttgcaccaaccta 4
>RF01061;mir-548;AC090451.6/112413-112496 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 64/77 (83%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 1 aggttgatgcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaatt 58
|||||| ||||||||| |||| | ||||| | |||||| || ||||||| || ||||
Sbjct: 80 aggttggtgcaaaagtgattgcagtttttgccattaaaagtaacagcaaaaaccacaatc 21
Query: 59 acttttgcaccaaccta 75
|||||||||||||||||
Sbjct: 20 acttttgcaccaaccta 4
>RF01061;mir-548;AADD01036043.1/27192-27275 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 caattacttttgcaccaaccta 75
||||||||||||||||||||||
Sbjct: 60 caattacttttgcaccaaccta 81
>RF01061;mir-548;AC121493.1/11246-11329 9606:Homo sapiens (human)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 caattacttttgcaccaaccta 75
||||||||||||||||||||||
Sbjct: 60 caattacttttgcaccaaccta 81
>RF01061;mir-548;CABD01142179.1/4659-4576 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 caattacttttgcaccaaccta 75
||||||||||||||||||||||
Sbjct: 60 caattacttttgcaccaaccta 81
>RF01061;mir-548;CABD01688067.1/1028-1113 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 86
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 caattacttttgcaccaaccta 75
||||||||||||||||||||||
Sbjct: 62 caattacttttgcaccaaccta 83
>RF01061;mir-548;CABD01009254.1/6580-6663 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 54 caattacttttgcaccaaccta 75
||||||||||||||||||||||
Sbjct: 25 caattacttttgcaccaaccta 4
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 caattacttttgcaccaaccta 75
||||||||||||||||||||||
Sbjct: 60 caattacttttgcaccaaccta 81
>RF01061;mir-548;CABD01524540.2/42-125 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 58/69 (84%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 9 gcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaattacttttgc 66
|||||||||||||||| ||||| | |||||| || |||||| || |||||||| ||||
Sbjct: 13 gcaaaagtaattgtggtttttgccattaaaagcgatggcaaaaaccgcaattactgttgc 72
Query: 67 accaaccta 75
||||||||
Sbjct: 73 tccaaccta 81
>RF01061;mir-548;AANU01290519.1/8633-8716 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 54 caattacttttgcaccaaccta 75
||||||||||||||||||||||
Sbjct: 25 caattacttttgcaccaaccta 4
>RF01061;mir-548;AANU01015630.1/1898-1815 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 caattacttttgcaccaaccta 75
||||||||||||||||||||||
Sbjct: 60 caattacttttgcaccaaccta 81
>RF01061;mir-548;AANU01260291.1/17494-17411 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 64/77 (83%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 1 aggttgatgcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaatt 58
|||||| ||||||| ||||||||| || || | |||||| ||| |||||| | |||||
Sbjct: 5 aggttggtgcaaaaataattgtggtttctgccattaaaagtaattgcaaaaatcgcaatt 64
Query: 59 acttttgcaccaaccta 75
| |||||||||||||||
Sbjct: 65 atttttgcaccaaccta 81
>RF01061;mir-548;AANU01124258.1/9508-9425 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 54 caattacttttgcaccaaccta 75
||||||||||||||||||||||
Sbjct: 25 caattacttttgcaccaaccta 4
Score = 44.1 bits (22), Expect = 2e-04
Identities = 61/73 (83%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 1 aggttgatgcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaatt 58
|||||| ||||||||||||||||| | ||| | ||||| ||| |||||| || |||||
Sbjct: 5 aggttggtgcaaaagtaattgtggttcttgcctataaaagtaatggcaaaaaccacaatt 64
Query: 59 acttttgcaccaa 71
||||||||||||
Sbjct: 65 tcttttgcaccaa 77
>RF01061;mir-548;AANU01272376.1/8292-8209 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 caattacttttgcaccaaccta 75
||||||||||||||||||||||
Sbjct: 60 caattacttttgcaccaaccta 81
>RF01061;mir-548;AANU01248525.1/14264-14347 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 2e-04
Identities = 61/73 (83%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 1 aggttgatgcaaaagtaattgtggattttgtcgttaaaa--aatagcaaaacccccaatt 58
|||||| ||||||||||||| ||| ||||| | | |||| ||| |||||| || |||||
Sbjct: 5 aggttggtgcaaaagtaattatggtttttgccatcaaaagcaatggcaaaaaccgcaatt 64
Query: 59 acttttgcaccaa 71
||||||| |||||
Sbjct: 65 acttttgtaccaa 77
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 55 aattacttttgcaccaaccta 75
|||||||||||||||||||||
Sbjct: 24 aattacttttgcaccaaccta 4
>RF01061;mir-548;ABGA01380877.1/47446-47363 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 caattacttttgcaccaacct 74
|||||||||||||||||||||
Sbjct: 60 caattacttttgcaccaacct 80
>RF01061;mir-548;AADC01015139.1/1187-1100 9606:Homo sapiens
(human)
Length = 88
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 44 gcaaaacccccaattacttttgcaccaac 72
|||||| || |||||||||||||||||||
Sbjct: 35 gcaaaaaccgcaattacttttgcaccaac 7
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 44 gcaaaacccccaattacttttgcaccaac 72
|||||| || |||||||||||||||||||
Sbjct: 54 gcaaaaaccgcaattacttttgcaccaac 82
>RF01061;mir-548;AC099678.2/65387-65470 9606:Homo sapiens (human)
Length = 84
Score = 42.1 bits (21), Expect = 0.001
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 39 aaatagcaaaacccccaattacttttgcaccaaccta 75
|||| |||||| || ||||||||| ||||||||||||
Sbjct: 40 aaatggcaaaaaccacaattacttgtgcaccaaccta 4
>RF01061;mir-548;CABD01616280.2/84-1 9595:Gorilla gorilla gorilla
(Western lowland gorilla)
Length = 84
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 55 aattacttttgcaccaaccta 75
|||||||||||||||||||||
Sbjct: 24 aattacttttgcaccaaccta 4
>RF01061;mir-548;CABD01085041.1/3135-3052 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 44 gcaaaacccccaattacttttgcaccaac 72
|||||| || |||||||||||||||||||
Sbjct: 35 gcaaaaaccgcaattacttttgcaccaac 7
>RF01061;mir-548;AANU01270843.1/85523-85605 9544:Macaca mulatta
(rhesus monkey)
Length = 83
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 54 caattacttttgcaccaacct 74
|||||||||||||||||||||
Sbjct: 25 caattacttttgcaccaacct 5
