miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28847_hsa-mir-548p:mirbase
Length = 84
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 attaggttggtataaaattaattgcagtttttgtcattactttcaatagcaaaaactgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attaggttggtataaaattaattgcagtttttgtcattactttcaatagcaaaaactgca 60
Query: 61 gttacttttgcaccaatgtaata 83
|||||||||||||||||||||||
Sbjct: 61 gttacttttgcaccaatgtaata 83
>28826_hsa-mir-548f-2:mirbase
Length = 98
Score = 75.8 bits (38), Expect = 4e-15
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 19 taattgcagtttttgtcattactttcaatagcaaaaactgcagttacttttgcaccaa 76
|||||||||||||| |||||||||| ||| |||||||||| | |||||||||||||||
Sbjct: 27 taattgcagtttttatcattacttttaatggcaaaaactgtaattacttttgcaccaa 84
Score = 38.2 bits (19), Expect = 0.001
Identities = 34/39 (87%)
Strand = Plus / Minus
Query: 1 attaggttggtataaaattaattgcagtttttgtcatta 39
||||||||||| |||| ||||| ||||||||| |||||
Sbjct: 90 attaggttggtgcaaaagtaattacagtttttgccatta 52
>28811_hsa-mir-548aj-2:mirbase
Length = 92
Score = 71.9 bits (36), Expect = 7e-14
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 1 attaggttggtataaaattaattgcagtttttgtcattactttcaatagcaaaaactgca 60
||||||||||| |||| ||||||||||||||| |||||||| ||| | ||||||||||
Sbjct: 6 attaggttggtgcaaaagtaattgcagtttttgctattacttttaatggtaaaaactgca 65
Query: 61 gttacttttgcaccaa 76
|||||||| ||||||
Sbjct: 66 attacttttacaccaa 81
Score = 71.9 bits (36), Expect = 7e-14
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 1 attaggttggtataaaattaattgcagtttttgtcattactttcaatagcaaaaactgca 60
||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||
Sbjct: 87 attaggttggtgtaaaagtaattgcagtttttaccattaaaagtaatagcaaaaactgca 28
Query: 61 gttacttttgcaccaa 76
|||||||||||||||
Sbjct: 27 attacttttgcaccaa 12
>28818_hsa-mir-548c:mirbase
Length = 97
Score = 71.9 bits (36), Expect = 7e-14
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 1 attaggttggtataaaattaattgcagtttttgtcattactttcaatagcaaaaactgca 60
||||||||||| |||| ||||||| ||||||| ||||||||||| ||||||||| ||
Sbjct: 12 attaggttggtgcaaaagtaattgcggtttttgccattactttcagtagcaaaaatctca 71
Query: 61 gttacttttgcaccaa 76
|||||||||||||||
Sbjct: 72 attacttttgcaccaa 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 49 gcaaaaactgcagttacttttgcaccaa 76
|||||||| ||| |||||||||||||||
Sbjct: 45 gcaaaaaccgcaattacttttgcaccaa 18
>28819_hsa-mir-548c:mirbase
Length = 97
Score = 71.9 bits (36), Expect = 7e-14
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 1 attaggttggtataaaattaattgcagtttttgtcattactttcaatagcaaaaactgca 60
||||||||||| |||| ||||||| ||||||| ||||||||||| ||||||||| ||
Sbjct: 12 attaggttggtgcaaaagtaattgcggtttttgccattactttcagtagcaaaaatctca 71
Query: 61 gttacttttgcaccaa 76
|||||||||||||||
Sbjct: 72 attacttttgcaccaa 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 49 gcaaaaactgcagttacttttgcaccaa 76
|||||||| ||| |||||||||||||||
Sbjct: 45 gcaaaaaccgcaattacttttgcaccaa 18
>28832_hsa-mir-548h-2:mirbase
Length = 88
Score = 71.9 bits (36), Expect = 7e-14
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 1 attaggttggtataaaattaattgcagtttttgtcattactttcaatagcaaaaactgca 60
||||||||||| |||| |||| || ||||||||||||||||||||| ||||| || ||
Sbjct: 3 attaggttggtgcaaaagtaatcgcggtttttgtcattactttcaatggcaaacaccaca 62
Query: 61 gttacttttgcaccaa 76
|||||||||||||||
Sbjct: 63 attacttttgcaccaa 78
>28857_hsa-mir-548z:mirbase
Length = 97
Score = 71.9 bits (36), Expect = 7e-14
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 1 attaggttggtataaaattaattgcagtttttgtcattactttcaatagcaaaaactgca 60
||||||||||| |||| ||||||| ||||||| ||||||||||| ||||||||| ||
Sbjct: 86 attaggttggtgcaaaagtaattgcggtttttgccattactttcagtagcaaaaatctca 27
Query: 61 gttacttttgcaccaa 76
|||||||||||||||
Sbjct: 26 attacttttgcaccaa 11
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 49 gcaaaaactgcagttacttttgcaccaa 76
|||||||| ||| |||||||||||||||
Sbjct: 53 gcaaaaaccgcaattacttttgcaccaa 80
>30473_ptr-mir-548c:mirbase
Length = 96
Score = 71.9 bits (36), Expect = 7e-14
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 1 attaggttggtataaaattaattgcagtttttgtcattactttcaatagcaaaaactgca 60
||||||||||| |||| ||||||| ||||||| ||||||||||| ||||||||| ||
Sbjct: 12 attaggttggtgcaaaagtaattgcggtttttgccattactttcagtagcaaaaatctca 71
Query: 61 gttacttttgcaccaa 76
|||||||||||||||
Sbjct: 72 attacttttgcaccaa 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 49 gcaaaaactgcagttacttttgcaccaa 76
|||||||| ||| |||||||||||||||
Sbjct: 45 gcaaaaaccgcaattacttttgcaccaa 18
>28833_hsa-mir-548h-3:mirbase
Length = 118
Score = 69.9 bits (35), Expect = 3e-13
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 2 ttaggttggtataaaattaattgcagtttttgtcattactttcaatagcaaaaactgcag 61
|||||||||| |||| ||||||||||||||| |||||||||||| ||||||| ||
Sbjct: 96 ttaggttggtgcaaaagtaattgcagtttttgctattactttcaatgacaaaaaccgcga 37
Query: 62 ttacttttgcaccaa 76
|||||||||||||||
Sbjct: 36 ttacttttgcaccaa 22
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 45 aatagcaaaaactgcagttacttttgcaccaa 76
|||||||||||||||| |||||||||||||||
Sbjct: 60 aatagcaaaaactgcaattacttttgcaccaa 91
>28001_mml-mir-548e:mirbase
Length = 97
Score = 65.9 bits (33), Expect = 4e-12
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 35 cattactttcaatagcaaaaactgcagttacttttgcaccaatgtaata 83
||||||||||||| |||||| | ||||||||||||||||||| ||||||
Sbjct: 46 cattactttcaatggcaaaaccggcagttacttttgcaccaacgtaata 94
>30474_ptr-mir-548f-1:mirbase
Length = 81
Score = 63.9 bits (32), Expect = 2e-11
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 25 cagtttttgtcattactttcaatagcaaaaactgcagttacttttgcaccaa 76
||||||||| |||||||||| || |||||||||| | |||||||||||||||
Sbjct: 22 cagtttttgccattactttctatggcaaaaactgtaattacttttgcaccaa 73
>28808_hsa-mir-548ah:mirbase
Length = 76
Score = 61.9 bits (31), Expect = 6e-11
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 14 aaaattaattgcagtttttgtcattactttcaatagcaaaaactgcagttacttttgcac 73
|||| ||| ||||||||||||||||||||| | | ||||| |||||| | ||||||||||
Sbjct: 66 aaaagtaactgcagtttttgtcattacttttattggcaaacactgcaatcacttttgcac 7
Query: 74 caa 76
|||
Sbjct: 6 caa 4
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 50 caaaaactgcagttacttttgcacca 75
||||||||||||||||||||||||||
Sbjct: 47 caaaaactgcagttacttttgcacca 72
>28828_hsa-mir-548f-4:mirbase
Length = 105
Score = 61.9 bits (31), Expect = 6e-11
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 14 aaaattaattgcagtttttgtcattactttcaatagcaaaaactgcagttacttttgcac 73
|||| ||||| ||||||||||||||||||| ||| |||||||| | ||||||||||||
Sbjct: 81 aaaagtaattacagtttttgtcattacttttaatggcaaaaaccactattacttttgcac 22
Query: 74 caa 76
|||
Sbjct: 21 caa 19
>30479_ptr-mir-548i-3:mirbase
Length = 148
Score = 61.9 bits (31), Expect = 6e-11
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 14 aaaattaattgcagtttttgtcattactttcaatagcaaaaactgcagttacttttgcac 73
|||| ||||||| ||||||| ||||||||| ||| |||||| | ||| ||||||||||||
Sbjct: 93 aaaaataattgctgtttttgccattacttttaatggcaaaatccgcaattacttttgcac 34
Query: 74 caa 76
|||
Sbjct: 33 caa 31
>28800_hsa-mir-548aa-2:mirbase
Length = 97
Score = 60.0 bits (30), Expect = 3e-10
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 27 gtttttgtcattactttcaatagcaaaaactgcagttacttttgcaccaa 76
||||||| ||||||||||||| |||||||| || |||||||||||||||
Sbjct: 31 gtttttgccattactttcaatggcaaaaaccacaattacttttgcaccaa 80
>28814_hsa-mir-548am:mirbase
Length = 74
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 7 ttggtataaaattaattgcagtttttgtcattactttcaatagcaaaaactgcagttact 66
|||||| |||| ||| ||||||||||| ||||| |||| | |||||||| ||| |||||
Sbjct: 72 ttggtacaaaagtaactgcagtttttgccattattttcgacggcaaaaaccgcaattact 13
Query: 67 tttgcaccaa 76
||||||||||
Sbjct: 12 tttgcaccaa 3
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 49 gcaaaaactgcagttacttttgcaccaatg 78
|||||||||||||||||||||| |||||||
Sbjct: 45 gcaaaaactgcagttacttttgtaccaatg 74
>28822_hsa-mir-548d-2:mirbase
Length = 97
Score = 60.0 bits (30), Expect = 3e-10
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 27 gtttttgtcattactttcaatagcaaaaactgcagttacttttgcaccaa 76
||||||| ||||||||||||| |||||||| || |||||||||||||||
Sbjct: 67 gtttttgccattactttcaatggcaaaaaccacaattacttttgcaccaa 18
>28823_hsa-mir-548d-2:mirbase
Length = 97
Score = 60.0 bits (30), Expect = 3e-10
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 27 gtttttgtcattactttcaatagcaaaaactgcagttacttttgcaccaa 76
||||||| ||||||||||||| |||||||| || |||||||||||||||
Sbjct: 67 gtttttgccattactttcaatggcaaaaaccacaattacttttgcaccaa 18
>28836_hsa-mir-548i-1:mirbase
Length = 149
Score = 60.0 bits (30), Expect = 3e-10
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 3 taggttggtataaaattaattgcagtttttgtcattactttcaatagcaaaaactgcagt 62
|||| ||||| |||| ||||||| |||||| ||||||||| ||| |||||| | ||| |
Sbjct: 105 taggctggtacaaaaataattgctatttttgccattacttttaatggcaaaatccgcaat 46
Query: 63 tacttttgcaccaa 76
||||||||||||||
Sbjct: 45 tacttttgcaccaa 32
>28837_hsa-mir-548i-2:mirbase
Length = 149
Score = 60.0 bits (30), Expect = 3e-10
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 3 taggttggtataaaattaattgcagtttttgtcattactttcaatagcaaaaactgcagt 62
|||| ||||| |||| ||||||| |||||| ||||||||| ||| |||||| | ||| |
Sbjct: 105 taggctggtacaaaaataattgctatttttgccattacttttaatggcaaaatccgcaat 46
Query: 63 tacttttgcaccaa 76
||||||||||||||
Sbjct: 45 tacttttgcaccaa 32
>30478_ptr-mir-548i-2:mirbase
Length = 148
Score = 60.0 bits (30), Expect = 3e-10
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 3 taggttggtataaaattaattgcagtttttgtcattactttcaatagcaaaaactgcagt 62
|||| ||||| |||| ||||||| ||||||| | ||||||| ||| |||||| | ||| |
Sbjct: 105 taggctggtacaaaaataattgctgtttttgccgttacttttaatggcaaaatccgcaat 46
Query: 63 tacttttgcaccaa 76
||||||||||||||
Sbjct: 45 tacttttgcaccaa 32
>30483_ptr-mir-548j:mirbase
Length = 111
Score = 60.0 bits (30), Expect = 3e-10
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 14 aaaattaattgcagtttttgtcattactttcaatagcaaaaactgcagttacttttgcac 73
|||| ||||||| || |||| |||||||||||| |||||||||||| ||||||||||||
Sbjct: 29 aaaagtaattgcggtctttgatattactttcaatggcaaaaactgca-ttacttttgcac 87
Query: 74 ca 75
||
Sbjct: 88 ca 89
>30509_ptr-mir-570:mirbase
Length = 81
Score = 60.0 bits (30), Expect = 3e-10
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 19 taattgcagtttttgtcattactttcaatagcaaaaactgcagttacttttgcaccaa 76
||||||| ||||||| ||| |||||||||||| ||||||||| | || ||||||||||
Sbjct: 21 taattgccgtttttgccatcactttcaatagcgaaaactgcaataacctttgcaccaa 78
>28810_hsa-mir-548aj-1:mirbase
Length = 72
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 13 taaaattaattgcagtttttgtcattactttcaatagcaaaaactgcagttacttttgca 72
||||| |||||||||||||| ||||||||| ||| ||| || ||||| |||||||| ||
Sbjct: 65 taaaagtaattgcagtttttaccattacttttaatggcataacctgcaattacttttaca 6
Query: 73 ccaat 77
|||||
Sbjct: 5 ccaat 1
>28831_hsa-mir-548h-1:mirbase
Length = 102
Score = 58.0 bits (29), Expect = 1e-09
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 1 attaggttggtataaaattaattgcagtttttgtcattactttcaatagcaaaaactgca 60
||||||| ||| |||| |||| || ||||||||||||||||| ||| | |||||||| |
Sbjct: 8 attaggtgggtgcaaaagtaatcgcggtttttgtcattacttttaatggtaaaaactgga 67
Query: 61 gttacttttgcac 73
||||||||||||
Sbjct: 68 attacttttgcac 80
>30476_ptr-mir-548h:mirbase
Length = 101
Score = 58.0 bits (29), Expect = 1e-09
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 1 attaggttggtataaaattaattgcagtttttgtcattactttcaatagcaaaaactgca 60
||||||| ||| |||| |||| || ||||||||||||||||| ||| | |||||||| |
Sbjct: 8 attaggtgggtgcaaaagtaatcgcggtttttgtcattacttttaatggtaaaaactgga 67
Query: 61 gttacttttgcac 73
||||||||||||
Sbjct: 68 attacttttgcac 80
>30481_ptr-mir-548i-5:mirbase
Length = 148
Score = 58.0 bits (29), Expect = 1e-09
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 20 aattgcagtttttgtcattactttcaatagcaaaaactgcagttacttttgcaccaa 76
|||||| ||||||| ||||||||| ||| |||||| | ||| |||||||||||||||
Sbjct: 87 aattgctgtttttgccattacttttaatggcaaaatccgcaattacttttgcaccaa 31
>30482_ptr-mir-548i-6:mirbase
Length = 148
Score = 58.0 bits (29), Expect = 1e-09
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 20 aattgcagtttttgtcattactttcaatagcaaaaactgcagttacttttgcaccaa 76
|||||| ||||||| ||||||||| ||| |||||| | ||| |||||||||||||||
Sbjct: 87 aattgctgtttttgccattacttttaatggcaaaatccgcaattacttttgcaccaa 31
>28825_hsa-mir-548f-1:mirbase
Length = 84
Score = 56.0 bits (28), Expect = 4e-09
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 1 attaggttggtataaaattaattgcagtttttgtcattactttcaatagcaaaaactgca 60
||||||||||| |||| |||| ||||||||| |||||||||||| ||||||||| |
Sbjct: 1 attaggttggtgcaaaagtaatcacagtttttgacattactttcaaagacaaaaactgta 60
Query: 61 gttacttttgcaccaa 76
||||||||| |||||
Sbjct: 61 attacttttggaccaa 76
Score = 38.2 bits (19), Expect = 0.001
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1 attaggttggtataaaattaattgcagtttttgtc 35
||||||||||| |||| ||||| |||||||||||
Sbjct: 82 attaggttggtccaaaagtaattacagtttttgtc 48
>28854_hsa-mir-548x:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 14 aaaattaattgcagtttttgtcattactttcaatagcaaaaactgcagttacttttgcac 73
|||| ||||||||||||||| | ||||||||||| | |||||||||| ||||||| |||
Sbjct: 11 aaaagtaattgcagtttttg-cgttactttcaatcgtaaaaactgcaattactttcacac 69
Query: 74 caat 77
||||
Sbjct: 70 caat 73
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 49 gcaaaaactgcagttacttttgcac 73
|||||||||||| ||||||||||||
Sbjct: 31 gcaaaaactgcaattacttttgcac 7
>28838_hsa-mir-548i-3:mirbase
Length = 149
Score = 54.0 bits (27), Expect = 2e-08
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 3 taggttggtataaaattaattgcagtttttgtcattactttcaatagcaaaaactgcagt 62
|||| ||||| |||| ||||||| |||||| ||||||||| ||| |||||| | ||| |
Sbjct: 105 taggctggtacaaaaataattgctatttttgccattacttttaatggcaaaatccgcaat 46
Query: 63 tacttttgcac 73
|||||||||||
Sbjct: 45 tacttttgcac 35
>28002_mml-mir-548f:mirbase
Length = 85
Score = 52.0 bits (26), Expect = 6e-08
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 35 cattactttcaatagcaaaaactgcagttacttttgcaccaa 76
||||||||||||| |||||| | ||| |||||||||||||||
Sbjct: 49 cattactttcaatggcaaaatccgcaattacttttgcaccaa 8
>28840_hsa-mir-548j:mirbase
Length = 112
Score = 52.0 bits (26), Expect = 6e-08
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 14 aaaattaattgcagtttttgtcattactttcaatagcaaaaactgcagttacttttgcac 73
|||| ||||||| || |||| |||||||||| | |||||||||||| ||||||||||||
Sbjct: 29 aaaagtaattgcggtctttggtattactttcagtggcaaaaactgca-ttacttttgcac 87
Query: 74 ca 75
||
Sbjct: 88 ca 89
>30477_ptr-mir-548i-1:mirbase
Length = 148
Score = 52.0 bits (26), Expect = 6e-08
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 3 taggttggtataaaattaattgcagtttttgtcattactttcaatagcaaaaactgcagt 62
|||| ||||| |||| ||||||| |||||| |||||| || ||| |||||| | ||| |
Sbjct: 105 taggctggtacaaaaataattgctatttttgccattacgtttaatggcaaaatccgcaat 46
Query: 63 tacttttgcaccaa 76
||||||||||||||
Sbjct: 45 tacttttgcaccaa 32
>28797_hsa-mir-548a-3:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 2e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 35 cattactttcaatagcaaaaactgcagttacttttgcaccaatgtaata 83
||||||||||||| |||||| ||| ||||||||||||||| ||||||
Sbjct: 46 cattactttcaatggcaaaactggcaattacttttgcaccaacgtaata 94
>28798_hsa-mir-548a-3:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 2e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 35 cattactttcaatagcaaaaactgcagttacttttgcaccaatgtaata 83
||||||||||||| |||||| ||| ||||||||||||||| ||||||
Sbjct: 46 cattactttcaatggcaaaactggcaattacttttgcaccaacgtaata 94
>28845_hsa-mir-548o:mirbase
Length = 114
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 aaaactgcagttacttttgcaccaa 76
|||||||||||||||||||||||||
Sbjct: 89 aaaactgcagttacttttgcaccaa 113
>28846_hsa-mir-548o-2:mirbase
Length = 70
Score = 50.1 bits (25), Expect = 2e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 35 cattactttcaatagcaaaaactgcagttacttttgcacca 75
||||||||| ||| |||||||| ||| ||||||||||||||
Sbjct: 41 cattacttttaatggcaaaaaccgcaattacttttgcacca 1
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 52 aaaactgcagttacttttgcacc 74
|||||||||||||||||||||||
Sbjct: 47 aaaactgcagttacttttgcacc 69
>30480_ptr-mir-548i-4:mirbase
Length = 148
Score = 50.1 bits (25), Expect = 2e-07
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 28 tttttgtcattactttcaatagcaaaaactgcagttacttttgcaccaa 76
|||||| ||||||||| ||| |||||| | ||| |||||||||||||||
Sbjct: 80 tttttgccattacttttaatggcaaaatccgcaattacttttgcaccaa 32
>28019_mml-mir-570:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 1 attaggttggtataaaattaattgcagtttttgtcattactttcaatagcaaaaactgca 60
||||||||||| ||| ||||||||||||||| ||||||||| || |||||| |||
Sbjct: 2 attaggttggtgcaaacgtaattgcagtttttgccattacttttaaaggcaaaagtagca 61
Query: 61 gttacttttgcaccaa 76
|||| ||||||||||
Sbjct: 62 attacctttgcaccaa 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 49 gcaaaaactgcagttacttttgcaccaa 76
|||||||||||| |||| ||||||||||
Sbjct: 35 gcaaaaactgcaattacgtttgcaccaa 8
>28842_hsa-mir-548l:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 49 gcaaaaactgcagttacttttgcaccaa 76
||||||||||||||||||| ||||||||
Sbjct: 50 gcaaaaactgcagttacttgtgcaccaa 77
>28853_hsa-mir-548w:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 49 gcaaaaactgcagttacttttgcaccaa 76
|||||||| |||||||||||||||||||
Sbjct: 30 gcaaaaaccgcagttacttttgcaccaa 3
>30470_ptr-mir-548a-1:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 29 ttttgtcattactttcaatagcaaaaactgcagttacttttgcaccaa 76
||||||| ||||||| ||| |||||||| || |||||||||||||||
Sbjct: 64 ttttgtcgttacttttaatggcaaaaaccacaattacttttgcaccaa 17
>30485_ptr-mir-548l:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 49 gcaaaaactgcagttacttttgcaccaa 76
||||||||||||||||||| ||||||||
Sbjct: 50 gcaaaaactgcagttacttgtgcaccaa 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 23 tgcagtttttgtcattactttcaatagcaaaaactgcagttacttttgcaccaa 76
||||||||||| |||||||||| || ||||| | ||| ||||||||||||||
Sbjct: 61 tgcagtttttgccattactttctatgacaaaacccgcaaatacttttgcaccaa 8
>28829_hsa-mir-548f-5:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 4e-06
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 1 attaggttggtataaaattaattgcagtttttgtcattactttcaat 47
|||||||||||| |||| ||||| |||||||| |||||||| ||||
Sbjct: 83 attaggttggtacaaaagtaattacagtttttcccattacttacaat 37
>28830_hsa-mir-548g:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 49 gcaaaaactgcagttacttttgcaccaatgtaata 83
|||||||||||| |||||||||||| ||| |||||
Sbjct: 38 gcaaaaactgcaattacttttgcactaatctaata 4
Score = 38.2 bits (19), Expect = 0.001
Identities = 54/63 (85%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 14 aaaattaattgcagtttttgtcattactttcaatagcaaaaactgcagttacttttgcac 73
|||| ||||||||||||||| |||||| ||| || || ||||||| | ||||||||| ||
Sbjct: 18 aaaagtaattgcagtttttg-cattacgttctatggc-aaaactgtaattacttttgtac 75
Query: 74 caa 76
|||
Sbjct: 76 caa 78
>28834_hsa-mir-548h-4:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 4e-06
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 1 attaggttggtataaaattaattgcagtttttgtcattacttt 43
||||||||||| |||| |||| || |||||||||||||||||
Sbjct: 4 attaggttggtgcaaaagtaatcgcggtttttgtcattacttt 46
Score = 46.1 bits (23), Expect = 4e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 1 attaggttggtataaaattaattgcagtttttgtcatta 39
||||||||||| |||| ||||||| |||||||||||||
Sbjct: 103 attaggttggtgcaaaagtaattgcggtttttgtcatta 65
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 50 caaaaactgcagttacttttgcaccaa 76
||||||| ||| |||||||||||||||
Sbjct: 71 caaaaaccgcaattacttttgcaccaa 97
>28855_hsa-mir-548x-2:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 1 attaggttggtataaaattaattgcagtttttgtcattactttcaatagcaaaa 54
|||||||||| | ||| |||||||||||||| ||||||||| ||| ||||||
Sbjct: 91 attaggttggcacgaaagtaattgcagtttttaccattacttttaatggcaaaa 38
>30471_ptr-mir-548a-2:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 29 ttttgtcattactttcaatagc-aaaaactgcagttacttttgcac 73
||||||||||||||| ||| || |||||| |||||||||||||||
Sbjct: 64 ttttgtcattacttttaatggcaaaaaaccccagttacttttgcac 19
>28805_hsa-mir-548ae-2:mirbase
Length = 67
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 19 taattgcagtttttgtcattacttt 43
||||||||||||||| |||||||||
Sbjct: 57 taattgcagtttttgccattacttt 33
>28849_hsa-mir-548s:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 52 aaaactgcagttacttttgcaccaa 76
||||||||||||| |||||||||||
Sbjct: 58 aaaactgcagttatttttgcaccaa 82
Score = 38.2 bits (19), Expect = 0.001
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 14 aaaattaattgcagtttttgtcattactttcaata 48
|||| ||||||||||||||| ||||| ||| ||||
Sbjct: 8 aaaaataattgcagtttttgccattatttttaata 42
>28795_hsa-mir-548a-1:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 29 ttttgtcattactttcaatagcaaaaactgcagttacttttgcaccaa 76
||||||| ||||||| ||| ||||||| || |||||||||||||||
Sbjct: 65 ttttgtcgttacttttaatggcaaaaatcacaattacttttgcaccaa 18
>28812_hsa-mir-548ak:mirbase
Length = 57
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 50 caaaaactgcagttacttttgcac 73
||||||| ||||||||||||||||
Sbjct: 24 caaaaaccgcagttacttttgcac 1
>28813_hsa-mir-548al:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 35 cattactttcaatagcaaaaactgcagttacttttgcacc 74
||||| ||| ||| |||||||| ||| |||||||||||||
Sbjct: 44 cattatttttaatggcaaaaacagcaattacttttgcacc 5
>28824_hsa-mir-548e:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 62/76 (81%)
Strand = Plus / Plus
Query: 1 attaggttggtataaaattaattgcagtttttgtcattactttcaatagcaaaaactgca 60
|||||||||||| |||| ||| || ||||||| |||||||| || ||||||||||
Sbjct: 3 attaggttggtacaaaagcaatcgcggtttttgctattacttttaaaggcaaaaactgag 62
Query: 61 gttacttttgcaccaa 76
||||||||||||||
Sbjct: 63 actacttttgcaccaa 78
>28827_hsa-mir-548f-3:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 49 gcaaaaactgcagttacttttgcaccaa 76
|||||||||| | |||||||||||||||
Sbjct: 52 gcaaaaactgtaattacttttgcaccaa 79
>28844_hsa-mir-548n:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 45 aatagcaaaaactgcagttacttttgcaccaa 76
|||||||||| | ||| |||||||||||||||
Sbjct: 39 aatagcaaaacccgcaattacttttgcaccaa 70
>28856_hsa-mir-548y:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 2e-04
Identities = 62/76 (81%)
Strand = Plus / Plus
Query: 1 attaggttggtataaaattaattgcagtttttgtcattactttcaatagcaaaaactgca 60
||||||||||| |||| |||| | ||||||| ||||||| ||| | |||||||| |
Sbjct: 10 attaggttggtgcaaaagtaatcactgtttttgccattactctcagtggcaaaaaccgtg 69
Query: 61 gttacttttgcaccaa 76
|||||||||||||||
Sbjct: 70 attacttttgcaccaa 85
>30475_ptr-mir-548f-2:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 49 gcaaaaactgcagttacttttgcaccaa 76
|||||||||| | |||||||||||||||
Sbjct: 52 gcaaaaactgtaattacttttgcaccaa 79
>27996_mml-mir-548a:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 0.001
Identities = 41/47 (87%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 31 ttgtcattactttcaatagc-aaaaactgcagttacttttgcaccaa 76
||||||||||||| ||| || |||||| || |||||||||||||||
Sbjct: 64 ttgtcattacttttaatggcaaaaaaccacaattacttttgcaccaa 18
>28815_hsa-mir-548an:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 0.001
Identities = 37/43 (86%)
Strand = Plus / Minus
Query: 1 attaggttggtataaaattaattgcagtttttgtcattacttt 43
||||||||||| |||| |||||| ||||||| |||||||||
Sbjct: 83 attaggttggtgcaaaaggaattgcggtttttgccattacttt 41
