miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28867_hsa-mir-554:mirbase
Length = 96
Score = 188 bits (95), Expect = 5e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 1 cctgagtaacctttgctagtcctgactcagccagtactggtcttagactggtgatgggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cctgagtaacctttgctagtcctgactcagccagtactggtcttagactggtgatgggtc 61
Query: 61 agggttcatattttggcatctctctctgggcatct 95
|||||||||||||||||||||||||||||||||||
Sbjct: 62 agggttcatattttggcatctctctctgggcatct 96
>28009_mml-mir-554:mirbase
Length = 96
Score = 149 bits (75), Expect = 4e-37
Identities = 90/95 (94%)
Strand = Plus / Plus
Query: 1 cctgagtaacctttgctagtcctgactcagccagtactggtcttagactggtgatgggtc 60
||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 2 cctgagtaacctttgctagtcctgactcagccagtactgatcttacactggcagtgggtc 61
Query: 61 agggttcatattttggcatctctctctgggcatct 95
|||||||||||||||||||||||||||||||||||
Sbjct: 62 agggttcatattttggcatctctctctgggcatct 96
>31137_ppy-mir-554:mirbase
Length = 95
Score = 149 bits (75), Expect = 4e-37
Identities = 91/95 (95%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 1 cctgagtaacctttgctagtcctgactcagccagtactggtcttagactggtgatgggtc 60
||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 2 cctgagtaacctttgctagtcct-actcagccggtactggtcttagactgatgatgggtc 60
Query: 61 agggttcatattttggcatctctctctgggcatct 95
|||||||||||||||||||||||| ||||||||||
Sbjct: 61 agggttcatattttggcatctctccctgggcatct 95
