miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>28868_hsa-mir-555:mirbase
          Length = 96

 Score =  188 bits (95), Expect = 5e-49
 Identities = 95/95 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  ggagtgaactcagatgtggagcactacctttgtgagcagtgtgacccaaggcctgtggac 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ggagtgaactcagatgtggagcactacctttgtgagcagtgtgacccaaggcctgtggac 60

                                             
Query: 61 agggtaagctgaacctctgataaaactctgatcta 95
          |||||||||||||||||||||||||||||||||||
Sbjct: 61 agggtaagctgaacctctgataaaactctgatcta 95




>31138_ppy-mir-555:mirbase
          Length = 96

 Score =  180 bits (91), Expect = 1e-46
 Identities = 94/95 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  ggagtgaactcagatgtggagcactacctttgtgagcagtgtgacccaaggcctgtggac 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ggagtgaactcagatgtggagcactacctttgtgagcagtgtgacccaaggcctgtggac 60

                                             
Query: 61 agggtaagctgaacctctgataaaactctgatcta 95
          ||||||||||| |||||||||||||||||||||||
Sbjct: 61 agggtaagctgcacctctgataaaactctgatcta 95