miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28869_hsa-mir-556:mirbase
Length = 95
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 atagtaataagaaagatgagctcattgtaatatgagcttcatttatacatttcatattac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atagtaataagaaagatgagctcattgtaatatgagcttcatttatacatttcatattac 61
Query: 61 cattagctcatcttttttattactaccttcaaca 94
||||||||||||||||||||||||||||||||||
Sbjct: 62 cattagctcatcttttttattactaccttcaaca 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 52 tcatattaccattagctcatcttttttattacta 85
||||||||| || ||||||||||| |||||||||
Sbjct: 36 tcatattacaatgagctcatctttcttattacta 3
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 2 tagtaataagaaagatgagctcattgtaatatga 35
||||||||| ||||||||||| || |||||||||
Sbjct: 86 tagtaataaaaaagatgagctaatggtaatatga 53
>28870_hsa-mir-556:mirbase
Length = 95
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 atagtaataagaaagatgagctcattgtaatatgagcttcatttatacatttcatattac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atagtaataagaaagatgagctcattgtaatatgagcttcatttatacatttcatattac 61
Query: 61 cattagctcatcttttttattactaccttcaaca 94
||||||||||||||||||||||||||||||||||
Sbjct: 62 cattagctcatcttttttattactaccttcaaca 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 52 tcatattaccattagctcatcttttttattacta 85
||||||||| || ||||||||||| |||||||||
Sbjct: 36 tcatattacaatgagctcatctttcttattacta 3
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 2 tagtaataagaaagatgagctcattgtaatatga 35
||||||||| ||||||||||| || |||||||||
Sbjct: 86 tagtaataaaaaagatgagctaatggtaatatga 53
>31139_ppy-mir-556:mirbase
Length = 95
Score = 155 bits (78), Expect = 7e-39
Identities = 90/94 (95%)
Strand = Plus / Plus
Query: 1 atagtaataagaaagatgagctcattgtaatatgagcttcatttatacatttcatattac 60
||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2 atagtgataagaaagatgagctcattgtaatatgagcttcatttatgcatttcatattac 61
Query: 61 cattagctcatcttttttattactaccttcaaca 94
||||||||||||||||||| |||||||||||||
Sbjct: 62 aattagctcatcttttttatgactaccttcaaca 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 2 tagtaataagaaagatgagctcattgtaatatga 35
|||| |||| ||||||||||| ||||||||||||
Sbjct: 86 tagtcataaaaaagatgagctaattgtaatatga 53
>31140_ppy-mir-556:mirbase
Length = 95
Score = 155 bits (78), Expect = 7e-39
Identities = 90/94 (95%)
Strand = Plus / Plus
Query: 1 atagtaataagaaagatgagctcattgtaatatgagcttcatttatacatttcatattac 60
||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2 atagtgataagaaagatgagctcattgtaatatgagcttcatttatgcatttcatattac 61
Query: 61 cattagctcatcttttttattactaccttcaaca 94
||||||||||||||||||| |||||||||||||
Sbjct: 62 aattagctcatcttttttatgactaccttcaaca 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 2 tagtaataagaaagatgagctcattgtaatatga 35
|||| |||| ||||||||||| ||||||||||||
Sbjct: 86 tagtcataaaaaagatgagctaattgtaatatga 53
>28010_mml-mir-556:mirbase
Length = 82
Score = 115 bits (58), Expect = 6e-27
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 1 atagtaataagaaagatgagctcattgtaatatgagcttcatttatacatttcatattac 60
|||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 2 atagtaatgagaaagatgaactcattgtaatatgagcttcatttatgcatttcatattac 61
Query: 61 cattagctcatctttttt 78
||||||| |||||||||
Sbjct: 62 aattagctgatctttttt 79
>28011_mml-mir-556:mirbase
Length = 82
Score = 115 bits (58), Expect = 6e-27
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 1 atagtaataagaaagatgagctcattgtaatatgagcttcatttatacatttcatattac 60
|||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 2 atagtaatgagaaagatgaactcattgtaatatgagcttcatttatgcatttcatattac 61
Query: 61 cattagctcatctttttt 78
||||||| |||||||||
Sbjct: 62 aattagctgatctttttt 79
