miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28872_hsa-mir-558:mirbase
Length = 94
Score = 141 bits (71), Expect = 1e-34
Identities = 74/75 (98%)
Strand = Plus / Plus
Query: 19 gttattttggtatagtagctctagactctattatagtttcctgagctgctgtaccaaaat 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20 gttattttggtatagtagctctagactctattatagtttcctgagctgctgtaccaaaat 79
Query: 79 accacaaatgggctg 93
|||||||| ||||||
Sbjct: 80 accacaaacgggctg 94
>31142_ppy-mir-558:mirbase
Length = 94
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 19 gttattttggtatagtagctctagactctattatagtttcctgagctgctgtaccaaaat 78
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 20 gttattttggtatagtagctctaggctctattatagtttcctgagctgctgtaccaaaat 79
Query: 79 accacaaa 86
||||||||
Sbjct: 80 accacaaa 87
>28013_mml-mir-558:mirbase
Length = 94
Score = 125 bits (63), Expect = 6e-30
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 20 ttattttggtatagtagctctagactctattatagtttcctgagctgctgtaccaaaata 79
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 ttattttggcatagtagctctagactctattatagtttcctgagctgctgtaccaaaata 80
Query: 80 ccacaaa 86
|||||||
Sbjct: 81 ccacaaa 87
