miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28873_hsa-mir-559:mirbase
Length = 96
Score = 180 bits (91), Expect = 1e-46
Identities = 94/95 (98%)
Strand = Plus / Plus
Query: 1 ctccagtaacatcttaaagtaaatatgcaccaaaattacttttggtaaatatagttttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2 ctccagtaacatcttaaagtaaatatgcaccaaaattacttttggtaaatacagttttgg 61
Query: 61 tgcatatttactttaggatgttactggagctccca 95
|||||||||||||||||||||||||||||||||||
Sbjct: 62 tgcatatttactttaggatgttactggagctccca 96
Score = 83.8 bits (42), Expect = 2e-17
Identities = 78/90 (86%)
Strand = Plus / Minus
Query: 1 ctccagtaacatcttaaagtaaatatgcaccaaaattacttttggtaaatatagttttgg 60
||||||||||||| ||||||||||||||||||||| | ||| ||| || ||||||
Sbjct: 90 ctccagtaacatcctaaagtaaatatgcaccaaaactgtatttaccaaaagtaattttgg 31
Query: 61 tgcatatttactttaggatgttactggagc 90
||||||||||||||| ||||||||||||||
Sbjct: 30 tgcatatttactttaagatgttactggagc 1
>31143_ppy-mir-559:mirbase
Length = 96
Score = 180 bits (91), Expect = 1e-46
Identities = 94/95 (98%)
Strand = Plus / Plus
Query: 1 ctccagtaacatcttaaagtaaatatgcaccaaaattacttttggtaaatatagttttgg 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2 ctccagtaacatcttaaagtaaataagcaccaaaattacttttggtaaatatagttttgg 61
Query: 61 tgcatatttactttaggatgttactggagctccca 95
|||||||||||||||||||||||||||||||||||
Sbjct: 62 tgcatatttactttaggatgttactggagctccca 96
Score = 83.8 bits (42), Expect = 2e-17
Identities = 78/90 (86%)
Strand = Plus / Minus
Query: 1 ctccagtaacatcttaaagtaaatatgcaccaaaattacttttggtaaatatagttttgg 60
||||||||||||| ||||||||||||||||||||| || ||| ||| || ||||||
Sbjct: 90 ctccagtaacatcctaaagtaaatatgcaccaaaactatatttaccaaaagtaattttgg 31
Query: 61 tgcatatttactttaggatgttactggagc 90
||| ||||||||||| ||||||||||||||
Sbjct: 30 tgcttatttactttaagatgttactggagc 1
