miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28878_hsa-mir-566:mirbase
Length = 94
Score = 184 bits (93), Expect = 7e-48
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 1 ctaggcgtggtggcgggcgcctgtgatcccaactactcaggaggctggggcagcagaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ctaggcgtggtggcgggcgcctgtgatcccaactactcaggaggctggggcagcagaatc 61
Query: 61 gcttgaacccgggaggcgaaggttgcagtgagc 93
|||||||||||||||||||||||||||||||||
Sbjct: 62 gcttgaacccgggaggcgaaggttgcagtgagc 94
>31147_ppy-mir-566:mirbase
Length = 90
Score = 170 bits (86), Expect = 1e-43
Identities = 89/90 (98%)
Strand = Plus / Plus
Query: 4 ggcgtggtggcgggcgcctgtgatcccaactactcaggaggctggggcagcagaatcgct 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1 ggcgtggtggcgggcgcctgtgatcccaactactcaggaggctggggcagcagaattgct 60
Query: 64 tgaacccgggaggcgaaggttgcagtgagc 93
||||||||||||||||||||||||||||||
Sbjct: 61 tgaacccgggaggcgaaggttgcagtgagc 90
>31332_ppy-mir-1273:mirbase
Length = 103
Score = 58.0 bits (29), Expect = 1e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 49 ggcagcagaatcgcttgaacccgggaggcgaaggttgcagtgagc 93
||||| ||||| |||||||||||||||| | ||||||||||||||
Sbjct: 4 ggcaggagaattgcttgaacccgggaggtggaggttgcagtgagc 48
>29124_hsa-mir-1273:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 3e-07
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 49 ggcagcagaatcgcttgaacccgggaggcgaaggttgcagtgagc 93
||||| ||||| ||||||||||||| || | ||||||||||||||
Sbjct: 4 ggcaggagaattgcttgaacccgggtggtggaggttgcagtgagc 48
>31328_ppy-mir-1268:mirbase
Length = 52
Score = 48.1 bits (24), Expect = 1e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 4 ggcgtggtggcgggcgcctgtgatcccaactactcaggaggctg 47
|||||||||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 7 ggcgtggtggtgggcgcctgtggtcccagctacttgggaggctg 50
