miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>28879_hsa-mir-567:mirbase
          Length = 98

 Score =  149 bits (75), Expect = 5e-37
 Identities = 75/75 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  gattcttataggacagtatgttcttccaggacagaacattctttgctattttgtactgga 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2  gattcttataggacagtatgttcttccaggacagaacattctttgctattttgtactgga 61

                         
Query: 61 agaacatgcaaaact 75
          |||||||||||||||
Sbjct: 62 agaacatgcaaaact 76




>31148_ppy-mir-567:mirbase
          Length = 97

 Score =  141 bits (71), Expect = 1e-34
 Identities = 74/75 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  gattcttataggacagtatgttcttccaggacagaacattctttgctattttgtactgga 60
          |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2  gattcttataggacagtatgttcttccagggcagaacattctttgctattttgtactgga 61

                         
Query: 61 agaacatgcaaaact 75
          |||||||||||||||
Sbjct: 62 agaacatgcaaaact 76




>28016_mml-mir-567:mirbase
          Length = 94

 Score =  133 bits (67), Expect = 3e-32
 Identities = 73/75 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  gattcttataggacagtatgttcttccaggacagaacattctttgctattttgtactgga 60
          |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2  gattcttacaggacactatgttcttccaggacagaacattctttgctattttgtactgga 61

                         
Query: 61 agaacatgcaaaact 75
          |||||||||||||||
Sbjct: 62 agaacatgcaaaact 76