miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>28881_hsa-mir-569:mirbase
          Length = 96

 Score =  180 bits (91), Expect = 1e-46
 Identities = 94/95 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  ggtattgttagattaattttgtgggacattaacgacagcatcagaagcaacatcagcttt 60
          ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1  ggtattgttagattaattttgtgggacattaacaacagcatcagaagcaacatcagcttt 60

                                             
Query: 61 agttaatgaatcctggaaagttaagtgactttatt 95
          |||||||||||||||||||||||||||||||||||
Sbjct: 61 agttaatgaatcctggaaagttaagtgactttatt 95




>28018_mml-mir-569:mirbase
          Length = 96

 Score =  172 bits (87), Expect = 3e-44
 Identities = 93/95 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  ggtattgttagattaattttgtgggacattaacgacagcatcagaagcaacatcagcttt 60
          ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 1  ggtattgttagattaattttgtgggacattaacaacagcatcagcagcaacatcagcttt 60

                                             
Query: 61 agttaatgaatcctggaaagttaagtgactttatt 95
          |||||||||||||||||||||||||||||||||||
Sbjct: 61 agttaatgaatcctggaaagttaagtgactttatt 95




>31150_ppy-mir-569:mirbase
          Length = 96

 Score =  165 bits (83), Expect = 7e-42
 Identities = 92/95 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1  ggtattgttagattaattttgtgggacattaacgacagcatcagaagcaacatcagcttt 60
          ||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||
Sbjct: 1  ggtattgttagattaattttgtgggacattaacaacatcatcagcagcaacatcagcttt 60

                                             
Query: 61 agttaatgaatcctggaaagttaagtgactttatt 95
          |||||||||||||||||||||||||||||||||||
Sbjct: 61 agttaatgaatcctggaaagttaagtgactttatt 95