miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28883_hsa-mir-571:mirbase
Length = 96
Score = 174 bits (88), Expect = 7e-45
Identities = 91/92 (98%)
Strand = Plus / Plus
Query: 1 cctcagtaagaccaagctcagtgtgccatttccttgtctgtagccatgtctatgggctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctcagtaagaccaagctcagtgtgccatttccttgtctgtagccatgtctatgggctct 60
Query: 61 tgagttggccatctgagcgagggcctgcttat 92
||||||||||||||||| ||||||||||||||
Sbjct: 61 tgagttggccatctgagtgagggcctgcttat 92
>31151_ppy-mir-571:mirbase
Length = 94
Score = 167 bits (84), Expect = 2e-42
Identities = 90/92 (97%)
Strand = Plus / Plus
Query: 1 cctcagtaagaccaagctcagtgtgccatttccttgtctgtagccatgtctatgggctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1 cctcagtaagaccaagctcagtgtgccatttccttgtctgtagccatgtctgtgggctct 60
Query: 61 tgagttggccatctgagcgagggcctgcttat 92
||||||||||||||||| ||||||||||||||
Sbjct: 61 tgagttggccatctgagtgagggcctgcttat 92
>28020_mml-mir-571:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 5e-15
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 1 cctcagtaagaccaagctcagtgtgccatttccttgtctgtagccatgtctatgggctct 60
|||||||||| |||| ||| || |||||| ||||||||||||||||||| |||||| |
Sbjct: 17 cctcagtaaggccaacctccatgcaccattttcttgtctgtagccatgtctgtgggctgt 76
Query: 61 tgagttggccatctgagcgagggcctgctt 90
|||||||||| ||| | ||||||||||||
Sbjct: 77 ggagttggccacctgggtgagggcctgctt 106
