miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28889_hsa-mir-576:mirbase
Length = 98
Score = 168 bits (85), Expect = 5e-43
Identities = 94/97 (96%)
Strand = Plus / Plus
Query: 1 acaatccaacgaggattctaatttctccacatctttggtaataagttttggcaaagatgt 60
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 2 acaatccaacgaggattctaatttctccacgtctttggtaataaggtttggcaaagatgt 61
Query: 61 ggaaaaattggaatcctcattcaattggttataacca 97
|||||||||||||||||||||| ||||||||||||||
Sbjct: 62 ggaaaaattggaatcctcattcgattggttataacca 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 2 caatccaacgaggattctaatttctccacatctttg 37
||||| || |||||||| ||||| ||||||||||||
Sbjct: 88 caatcgaatgaggattccaatttttccacatctttg 53
>28890_hsa-mir-576:mirbase
Length = 98
Score = 168 bits (85), Expect = 5e-43
Identities = 94/97 (96%)
Strand = Plus / Plus
Query: 1 acaatccaacgaggattctaatttctccacatctttggtaataagttttggcaaagatgt 60
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 2 acaatccaacgaggattctaatttctccacgtctttggtaataaggtttggcaaagatgt 61
Query: 61 ggaaaaattggaatcctcattcaattggttataacca 97
|||||||||||||||||||||| ||||||||||||||
Sbjct: 62 ggaaaaattggaatcctcattcgattggttataacca 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 2 caatccaacgaggattctaatttctccacatctttg 37
||||| || |||||||| ||||| ||||||||||||
Sbjct: 88 caatcgaatgaggattccaatttttccacatctttg 53
>31154_ppy-mir-576:mirbase
Length = 98
Score = 161 bits (81), Expect = 1e-40
Identities = 93/97 (95%)
Strand = Plus / Plus
Query: 1 acaatccaacgaggattctaatttctccacatctttggtaataagttttggcaaagatgt 60
||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2 acaatccaatgaggattctaatttctccatgtctttggtaataagttttggcaaagatgt 61
Query: 61 ggaaaaattggaatcctcattcaattggttataacca 97
|||||||||||||||||||||| ||||||||||||||
Sbjct: 62 ggaaaaattggaatcctcattcgattggttataacca 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 2 caatccaacgaggattctaatttctccacatctttg 37
||||| || |||||||| ||||| ||||||||||||
Sbjct: 88 caatcgaatgaggattccaatttttccacatctttg 53
>31155_ppy-mir-576:mirbase
Length = 98
Score = 161 bits (81), Expect = 1e-40
Identities = 93/97 (95%)
Strand = Plus / Plus
Query: 1 acaatccaacgaggattctaatttctccacatctttggtaataagttttggcaaagatgt 60
||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2 acaatccaatgaggattctaatttctccatgtctttggtaataagttttggcaaagatgt 61
Query: 61 ggaaaaattggaatcctcattcaattggttataacca 97
|||||||||||||||||||||| ||||||||||||||
Sbjct: 62 ggaaaaattggaatcctcattcgattggttataacca 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 2 caatccaacgaggattctaatttctccacatctttg 37
||||| || |||||||| ||||| ||||||||||||
Sbjct: 88 caatcgaatgaggattccaatttttccacatctttg 53
>28023_mml-mir-576:mirbase
Length = 95
Score = 155 bits (78), Expect = 7e-39
Identities = 90/94 (95%)
Strand = Plus / Plus
Query: 1 acaatccaacgaggattctaatttctccacatctttggtaataagttttggcaaagatgt 60
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 acaatccagtgaggattctaatttctccacatctttggtaataagttttggcaaagatgt 61
Query: 61 ggaaaaattggaatcctcattcaattggttataa 94
||||||||||||||||||||| |||||||||||
Sbjct: 62 ggaaaaattggaatcctcattggattggttataa 95
Score = 52.0 bits (26), Expect = 7e-08
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 2 caatccaacgaggattctaatttctccacatctttggtaataagttttggcaaagatgtg 61
|||||||| |||||||| ||||| |||||||||||| || | | || ||||||||||
Sbjct: 88 caatccaatgaggattccaatttttccacatctttgccaaaacttattaccaaagatgtg 29
Query: 62 gaaaaattggaatcctca 79
|| ||||| |||||||||
Sbjct: 28 gagaaattagaatcctca 11
>28024_mml-mir-576:mirbase
Length = 95
Score = 155 bits (78), Expect = 7e-39
Identities = 90/94 (95%)
Strand = Plus / Plus
Query: 1 acaatccaacgaggattctaatttctccacatctttggtaataagttttggcaaagatgt 60
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 acaatccagtgaggattctaatttctccacatctttggtaataagttttggcaaagatgt 61
Query: 61 ggaaaaattggaatcctcattcaattggttataa 94
||||||||||||||||||||| |||||||||||
Sbjct: 62 ggaaaaattggaatcctcattggattggttataa 95
Score = 52.0 bits (26), Expect = 7e-08
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 2 caatccaacgaggattctaatttctccacatctttggtaataagttttggcaaagatgtg 61
|||||||| |||||||| ||||| |||||||||||| || | | || ||||||||||
Sbjct: 88 caatccaatgaggattccaatttttccacatctttgccaaaacttattaccaaagatgtg 29
Query: 62 gaaaaattggaatcctca 79
|| ||||| |||||||||
Sbjct: 28 gagaaattagaatcctca 11
