miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28894_hsa-mir-580:mirbase
Length = 97
Score = 182 bits (92), Expect = 3e-47
Identities = 95/96 (98%)
Strand = Plus / Plus
Query: 1 taaaatttccaattggaacctaatgattcatcagactcagatatttaagttaacagtatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 taaaatttccaattggaacctaatgattcatcagactcagatatttaagttaacagtatt 61
Query: 61 tgagaatgatgaatcattaggttccagtcagaaatt 96
||||||||||||||||||||||||| ||||||||||
Sbjct: 62 tgagaatgatgaatcattaggttccggtcagaaatt 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 67 tgatgaatcattaggttcca 86
||||||||||||||||||||
Sbjct: 34 tgatgaatcattaggttcca 15
>28028_mml-mir-580:mirbase
Length = 97
Score = 167 bits (84), Expect = 2e-42
Identities = 93/96 (96%)
Strand = Plus / Plus
Query: 1 taaaatttccaattggaacctaatgattcatcagactcagatatttaagttaacagtatt 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 taaaatttccagttggaacctaatgattcatcagactcagatatttaagttaacagtatt 61
Query: 61 tgagaatgatgaatcattaggttccagtcagaaatt 96
|||| ||||||||||||||||||||||||||||||
Sbjct: 62 tgagtctgatgaatcattaggttccagtcagaaatt 97
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 14 tggaacctaatgattcatcagactca 39
||||||||||||||||||||||||||
Sbjct: 87 tggaacctaatgattcatcagactca 62
>31159_ppy-mir-580:mirbase
Length = 97
Score = 167 bits (84), Expect = 2e-42
Identities = 93/96 (96%)
Strand = Plus / Plus
Query: 1 taaaatttccaattggaacctaatgattcatcagactcagatatttaagttaacagtatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 taaaatttccaattggaacctaatgattcatcagactcagatatttaagttaacagtatt 61
Query: 61 tgagaatgatgaatcattaggttccagtcagaaatt 96
|||| |||||||||||||||||||||| |||||||
Sbjct: 62 tgagtctgatgaatcattaggttccagttagaaatt 97
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 4 aatttccaattggaacctaatgattcatcagactca 39
|||||| || ||||||||||||||||||||||||||
Sbjct: 97 aatttctaactggaacctaatgattcatcagactca 62
