miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00927;mir-582;CT033775.6/20304-20401 10090:Mus musculus (house
mouse)
Length = 98
Score = 135 bits (68), Expect = 1e-31
Identities = 83/88 (94%)
Strand = Plus / Plus
Query: 1 tctgtgctctttgattacagttgttcaaccagttactaatctaactaattgtaactggtt 60
||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2 tctgtactctttggatacagttgttcaaccagttactaatctaactaattgtaacctgtt 61
Query: 61 gaacaactgaacccaaagggtgcaaagt 88
||||||||||||||||||||||||||||
Sbjct: 62 gaacaactgaacccaaagggtgcaaagt 89
>RF00927;mir-582;AAGW01418452.1/1411-1508 9986:Oryctolagus
cuniculus (rabbit)
Length = 98
Score = 127 bits (64), Expect = 3e-29
Identities = 82/88 (93%)
Strand = Plus / Plus
Query: 1 tctgtgctctttgattacagttgttcaaccagttactaatctaactaattgtaactggtt 60
||||| ||||||| |||||||||||||||||||||||||||||||||| |||||| || |
Sbjct: 2 tctgtactctttggttacagttgttcaaccagttactaatctaactaagtgtaaccggct 61
Query: 61 gaacaactgaacccaaagggtgcaaagt 88
|||||||||||||||||||||||||||
Sbjct: 62 aaacaactgaacccaaagggtgcaaagt 89
>RF00927;mir-582;ABRQ01138481.1/6071-5974 9813:Procavia capensis
(cape rock hyrax)
Length = 98
Score = 125 bits (63), Expect = 1e-28
Identities = 81/87 (93%)
Strand = Plus / Plus
Query: 1 tctgtgctctttgattacagttgttcaaccagttactaatctaactaattgtaactggtt 60
||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 2 tctgtactctttggttacagttgttcaaccagttactaatctagctaattgtaacccgtt 61
Query: 61 gaacaactgaacccaaagggtgcaaag 87
||||||||||| |||||||||||||||
Sbjct: 62 gaacaactgaatccaaagggtgcaaag 88
