miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28898_hsa-mir-583:mirbase
Length = 75
Score = 147 bits (74), Expect = 1e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 1 aactcacacattaaccaaagaggaaggtcccattactgcagggatcttagcagtactggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aactcacacattaaccaaagaggaaggtcccattactgcagggatcttagcagtactggg 60
Query: 61 acctacctctttgg 74
||||||||||||||
Sbjct: 61 acctacctctttgg 74
>28032_mml-mir-583:mirbase
Length = 75
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 1 aactcacacattaaccaaagaggaaggtcccattactgcagggatcttagcagtactggg 60
||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 aactcgcacatttaccaaagaggaaggtcccagtactgcagggatcttagcagtactggg 60
Query: 61 acctacctctttgg 74
||||||||||||||
Sbjct: 61 acctacctctttgg 74
Score = 50.1 bits (25), Expect = 2e-07
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 14 accaaagaggaaggtcccattactgcagggatcttagcagtactgggacctacctctttg 73
|||||||||| |||||||| |||||| |||| ||||||||||||||| ||||||||
Sbjct: 75 accaaagaggtaggtcccagtactgctaagatccctgcagtactgggaccttcctctttg 16
Query: 74 g 74
|
Sbjct: 15 g 15
>31163_ppy-mir-583:mirbase
Length = 75
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 1 aactcacacattaaccaaagaggaaggtcccattactgcagggatcttagcagtactggg 60
|||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 1 aactcacacatttaccaaagaggaaggtcccagtactccagggatcttagcagtactggg 60
Query: 61 acctacctctttgg 74
||||||||||||||
Sbjct: 61 acctacctctttgg 74
Score = 42.1 bits (21), Expect = 5e-05
Identities = 51/61 (83%)
Strand = Plus / Minus
Query: 14 accaaagaggaaggtcccattactgcagggatcttagcagtactgggacctacctctttg 73
|||||||||| |||||||| |||||| |||| | ||||||||||||| ||||||||
Sbjct: 75 accaaagaggtaggtcccagtactgctaagatccctggagtactgggaccttcctctttg 16
Query: 74 g 74
|
Sbjct: 15 g 15
