miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28899_hsa-mir-584:mirbase
Length = 97
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 tagggtgaccagccattatggtttgcctgggactgaggaatttgctgggatatgtcagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagggtgaccagccattatggtttgcctgggactgaggaatttgctgggatatgtcagtt 60
Query: 61 ccaggccaaccaggctggttggtctccctgaagcaa 96
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccaggccaaccaggctggttggtctccctgaagcaa 96
>31164_ppy-mir-584:mirbase
Length = 97
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 tagggtgaccagccattatggtttgcctgggactgaggaatttgctgggatatgtcagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagggtgaccagccattatggtttgcctgggactgaggaatttgctgggatatgtcagtt 60
Query: 61 ccaggccaaccaggctggttggtctccctgaagcaa 96
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccaggccaaccaggctggttggtctccctgaagcaa 96
>28033_mml-mir-584:mirbase
Length = 97
Score = 182 bits (92), Expect = 3e-47
Identities = 95/96 (98%)
Strand = Plus / Plus
Query: 1 tagggtgaccagccattatggtttgcctgggactgaggaatttgctgggatatgtcagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagggtgaccagccattatggtttgcctgggactgaggaatttgctgggatatgtcagtt 60
Query: 61 ccaggccaaccaggctggttggtctccctgaagcaa 96
||||||||||||||||||||||| ||||||||||||
Sbjct: 61 ccaggccaaccaggctggttggtttccctgaagcaa 96
>33426_bta-mir-584-3:mirbase
Length = 85
Score = 54.0 bits (27), Expect = 2e-08
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 1 tagggtgaccagccattatggtttgcctgggactgaggaatttgctgggat 51
||||||||||| | || ||||||||||||||||||| ||||| |||||||
Sbjct: 1 tagggtgaccaactatcctggtttgcctgggactgagaaatttcctgggat 51
>33424_bta-mir-584-1:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 atggtttgcctgggactgagg 38
|||||||||||||||||||||
Sbjct: 18 atggtttgcctgggactgagg 38
>33425_bta-mir-584-2:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 19 tggtttgcctgggactgagga 39
|||||||||||||||||||||
Sbjct: 20 tggtttgcctgggactgagga 40
>33428_bta-mir-584-5:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 tggtttgcctgggactgagg 38
||||||||||||||||||||
Sbjct: 19 tggtttgcctgggactgagg 38
>33429_bta-mir-584-6:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 tggtttgcctgggactgagg 38
||||||||||||||||||||
Sbjct: 19 tggtttgcctgggactgagg 38
>33430_bta-mir-584-7:mirbase
Length = 67
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 tggtttgcctgggactgagg 38
||||||||||||||||||||
Sbjct: 18 tggtttgcctgggactgagg 37
>33431_bta-mir-584-8:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 cattatggtttgcctgggactgag 37
|||| |||||||||||||||||||
Sbjct: 13 cattctggtttgcctgggactgag 36
