miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28901_hsa-mir-586:mirbase
Length = 97
Score = 174 bits (88), Expect = 7e-45
Identities = 94/96 (97%)
Strand = Plus / Plus
Query: 1 atggggtaaaaccattatgcattgtatttttaggtcccaatacgtgtgggccctaaaaat 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 atggggtaaaaccattatgcattgtatttttaggtcccaatacatgtgggccctaaaaat 60
Query: 61 acaatgcataatggtttttcactttttatcttctta 96
||||||||||||||||||||||| ||||||||||||
Sbjct: 61 acaatgcataatggtttttcactctttatcttctta 96
Score = 71.9 bits (36), Expect = 8e-14
Identities = 65/72 (90%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 8 aaaaccattatgcattgtatttttaggtcccaatacgtgt-gggccctaaaaatacaatg 66
||||||||||||||||||||||||||| |||| | || | ||| |||||||||||||||
Sbjct: 78 aaaaccattatgcattgtatttttagggcccac-atgtattgggacctaaaaatacaatg 20
Query: 67 cataatggtttt 78
||||||||||||
Sbjct: 19 cataatggtttt 8
>31165_ppy-mir-586:mirbase
Length = 97
Score = 151 bits (76), Expect = 1e-37
Identities = 91/96 (94%)
Strand = Plus / Plus
Query: 1 atggggtaaaaccattatgcattgtatttttaggtcccaatacgtgtgggccctaaaaat 60
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 1 atggggtaaaaccattatgcattgtatttttaggtcccaatgcgtgtgagccctaaaaat 60
Query: 61 acaatgcataatggtttttcactttttatcttctta 96
||||||| ||||||||||| ||| ||||||||||||
Sbjct: 61 acaatgcgtaatggttttttactctttatcttctta 96
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 47 tgggccctaaaaatacaatgcataatggtttt 78
|||| |||||||||||||||||||||||||||
Sbjct: 39 tgggacctaaaaatacaatgcataatggtttt 8
>28034_mml-mir-586:mirbase
Length = 99
Score = 133 bits (67), Expect = 3e-32
Identities = 91/98 (92%), Gaps = 2/98 (2%)
Strand = Plus / Plus
Query: 1 atggggtaaaaccattatgcat--tgtatttttaggtcccaatacgtgtgggccctaaaa 58
|||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 1 atggggtaaaaccattatgcatattgtatttttaggtcccaatacgtgtggaccctaaaa 60
Query: 59 atacaatgcataatggtttttcactttttatcttctta 96
|| ||||||||||||||||| ||| ||||||||||||
Sbjct: 61 atgcaatgcataatggttttatactctttatcttctta 98
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 7 taaaaccattatgcattgtatttttagg 34
|||||||||||||||||| |||||||||
Sbjct: 81 taaaaccattatgcattgcatttttagg 54
