miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00992;mir-593;AANU01285987.1/6423-6324 9544:Macaca mulatta
           (rhesus monkey)
          Length = 100

 Score =  165 bits (83), Expect = 1e-40
 Identities = 95/99 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccccagaatctgtcaggcaccagccaggcattgctcagcccctttccctctgggggagca 60
           ||||||| | ||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 2   ccccagagtgtgtcaggcatcagccaggcatcgctcagcccctttccctctgggggagca 61

                                                  
Query: 61  aggagtggtgctgggtttgtctctgctggggtttctcct 99
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 62  aggagtggtgctgggtttgtctctgctggggtttctcct 100




>RF00992;mir-593;AAGV020437456.1/676-558 9361:Dasypus novemcinctus
           (nine-banded armadillo)
          Length = 119

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 71  ctgggtttgtctctgctggggtttctcct 99
           ||||| |||||||||||||||||||||||
Sbjct: 91  ctgggcttgtctctgctggggtttctcct 119