miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>28911_hsa-mir-596:mirbase
          Length = 77

 Score =  137 bits (69), Expect = 1e-33
 Identities = 75/77 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  agcacggcctctccgaagcctgcccggctccgcgggaacctgcctcccgcatggcagctg 60
          ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1  agcacggcctctccgaagcctgcccggctcctcgggaacctgcctcccgcatggcagctg 60

                           
Query: 61 ctgcccttcagaggccg 77
          ||||||||| |||||||
Sbjct: 61 ctgcccttcggaggccg 77




>31175_ppy-mir-596:mirbase
          Length = 77

 Score = 97.6 bits (49), Expect = 1e-21
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                      
Query: 1  agcacggcctctccgaagcctgcccggctccgcgggaacctgcctcccgcatggcagctg 60
          ||||| |||||||| ||||||||| |||||| ||||||||||||||||||| |||||| |
Sbjct: 1  agcacagcctctcccaagcctgcctggctcctcgggaacctgcctcccgcacggcagccg 60

                           
Query: 61 ctgcccttcagaggccg 77
          | |||||||||||||||
Sbjct: 61 ccgcccttcagaggccg 77