miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28915_hsa-mir-600:mirbase
Length = 98
Score = 192 bits (97), Expect = 3e-50
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1 aagtcacgtgctgtggctccagcttcataggaaggctcttgtctgtcaggcagtggagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtcacgtgctgtggctccagcttcataggaaggctcttgtctgtcaggcagtggagtt 60
Query: 61 acttacagacaagagccttgctcaggccagccctgcc 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 acttacagacaagagccttgctcaggccagccctgcc 97
>31179_ppy-mir-600:mirbase
Length = 94
Score = 151 bits (76), Expect = 1e-37
Identities = 92/97 (94%), Gaps = 4/97 (4%)
Strand = Plus / Plus
Query: 1 aagtcacgtgctgtggctccagcttcataggaaggctcttgtctgtcaggcagtggagtt 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 aagtcacgtgctgtggctccagcttcataggaaggctcttgtctgtcaagcagtggag-- 58
Query: 61 acttacagacaagagccttgctcaggccagccctgcc 97
|||||||||||||||||||||||||||||||||||
Sbjct: 59 --ttacagacaagagccttgctcaggccagccctgcc 93
>28045_mml-mir-600:mirbase
Length = 94
Score = 127 bits (64), Expect = 2e-30
Identities = 89/97 (91%), Gaps = 4/97 (4%)
Strand = Plus / Plus
Query: 1 aagtcacgtgctgtggctccagcttcataggaaggctcttgtctgtcaggcagtggagtt 60
||||||| | ||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1 aagtcacttactgtgtctccagcttcacaggaaggctcttgtctgtcaggcagtggag-- 58
Query: 61 acttacagacaagagccttgctcaggccagccctgcc 97
|||||||||||||||||||||||||||||||||||
Sbjct: 59 --ttacagacaagagccttgctcaggccagccctgcc 93
