miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>28919_hsa-mir-604:mirbase
          Length = 94

 Score =  163 bits (82), Expect = 3e-41
 Identities = 91/94 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1  agagcatcgtgcttgaccttccacgctcctgtgtccactagcaggcaggttttctgacac 60
          ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 1  agagcatcgtgcttgaccttccacgctctcgtgtccactagcaggcaggttttctgacac 60

                                            
Query: 61 aggctgcgggattcaggacagtgcatcatggaga 94
          ||||||||| ||||||||||||||||||||||||
Sbjct: 61 aggctgcggaattcaggacagtgcatcatggaga 94




>28048_mml-mir-604:mirbase
          Length = 94

 Score =  155 bits (78), Expect = 7e-39
 Identities = 90/94 (95%)
 Strand = Plus / Plus

                                                                      
Query: 1  agagcatcgtgcttgaccttccacgctcctgtgtccactagcaggcaggttttctgacac 60
          ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1  agagcatcgtgcttgaccttccacgctcccgtgtccactagcaggcaggttttctgacac 60

                                            
Query: 61 aggctgcgggattcaggacagtgcatcatggaga 94
           |||||||||||||||||||| |||||| |||||
Sbjct: 61 gggctgcgggattcaggacagcgcatcacggaga 94




>31183_ppy-mir-604:mirbase
          Length = 94

 Score =  155 bits (78), Expect = 7e-39
 Identities = 90/94 (95%)
 Strand = Plus / Plus

                                                                      
Query: 1  agagcatcgtgcttgaccttccacgctcctgtgtccactagcaggcaggttttctgacac 60
          |||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 1  agagcatcgtgcttcaccttccatgctcccgtgtccactagcaggcaggttttctgacac 60

                                            
Query: 61 aggctgcgggattcaggacagtgcatcatggaga 94
          ||||||||||||||||||||| ||||||||||||
Sbjct: 61 aggctgcgggattcaggacagcgcatcatggaga 94