miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31184_ppy-mir-605:mirbase
Length = 80
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 ccctagcttggttctaaatcccatggtgccttctccttgggaaaaacagagaaggcacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccctagcttggttctaaatcccatggtgccttctccttgggaaaaacagagaaggcacta 61
Query: 61 tgggatttagaaccaagtt 79
|||||||||||||||||||
Sbjct: 62 tgggatttagaaccaagtt 80
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 49 gagaaggcactatgggatttagaaccaagttagg 82
|||||||||| |||||||||||||||||| ||||
Sbjct: 36 gagaaggcaccatgggatttagaaccaagctagg 3
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 7 cttggttctaaatcccatggtgccttctc 35
|||||||||||||||||| ||||||||||
Sbjct: 78 cttggttctaaatcccatagtgccttctc 50
>28049_mml-mir-605:mirbase
Length = 82
Score = 147 bits (74), Expect = 1e-36
Identities = 80/82 (97%)
Strand = Plus / Plus
Query: 1 ccctagcttggttctaaatcccatggtgccttctccttgggaaaaacagagaaggcacta 60
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 ccctagcttggttctaaatcccacggtgccttctccttgggaaaaacagagaaggcactg 60
Query: 61 tgggatttagaaccaagttagg 82
||||||||||||||||||||||
Sbjct: 61 tgggatttagaaccaagttagg 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 49 gagaaggcactatgggatttagaaccaagttagg 82
|||||||||| ||||||||||||||||| ||||
Sbjct: 35 gagaaggcaccgtgggatttagaaccaagctagg 2
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 2 cctagcttggttctaaatcccatggtgccttctc 35
|||| ||||||||||||||||| ||||||||||
Sbjct: 82 cctaacttggttctaaatcccacagtgccttctc 49
>28920_hsa-mir-605:mirbase
Length = 83
Score = 147 bits (74), Expect = 1e-36
Identities = 80/82 (97%)
Strand = Plus / Plus
Query: 1 ccctagcttggttctaaatcccatggtgccttctccttgggaaaaacagagaaggcacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccctagcttggttctaaatcccatggtgccttctccttgggaaaaacagagaaggcacta 61
Query: 61 tgggatttagaaccaagttagg 82
|| ||||||||| |||||||||
Sbjct: 62 tgagatttagaatcaagttagg 83
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 49 gagaaggcactatgggatttagaaccaagttagg 82
|||||||||| |||||||||||||||||| ||||
Sbjct: 36 gagaaggcaccatgggatttagaaccaagctagg 3
