miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28925_hsa-mir-610:mirbase
Length = 96
Score = 95.6 bits (48), Expect = 1e-20
Identities = 55/56 (98%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 1 ctatttgtcttaggtgagctaaatgtgtgctgggacaca-ttgagccaaatgtccc 55
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2 ctatttgtcttaggtgagctaaatgtgtgctgggacacatttgagccaaatgtccc 57
Score = 69.9 bits (35), Expect = 7e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 164 cacatttagctcacataagaaaaatggactctagt 198
|||||||||||||||||||||||||||||||||||
Sbjct: 62 cacatttagctcacataagaaaaatggactctagt 96
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 3 atttgtcttaggtgagctaaatgtgtgctgggaca 37
|||| ||||| ||||||||||||||||||||||||
Sbjct: 86 atttttcttatgtgagctaaatgtgtgctgggaca 52
>31188_ppy-mir-610:mirbase
Length = 96
Score = 87.7 bits (44), Expect = 3e-18
Identities = 54/56 (96%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 1 ctatttgtcttaggtgagctaaatgtgtgctgggacaca-ttgagccaaatgtccc 55
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 2 ctatttgtcttaggtgagctaaatgtgtgctgggacacatttgagccaaacgtccc 57
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 167 atttagctcacataagaaaaatggactctagt 198
||||||||||||||||||||||||||||||||
Sbjct: 65 atttagctcacataagaaaaatggactctagt 96
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 atttgtcttaggtgagctaaatgtgtgctgggac 36
|||| ||||| ||||||||||| |||||||||||
Sbjct: 86 atttttcttatgtgagctaaatctgtgctgggac 53
