miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28927_hsa-mir-612:mirbase
Length = 100
Score = 196 bits (99), Expect = 2e-51
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 1 cccatctggaccctgctgggcagggcttctgagctccttagcactagcaggaggggctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cccatctggaccctgctgggcagggcttctgagctccttagcactagcaggaggggctcc 61
Query: 61 aggggccctccctccatggcagccaggacaggactctca 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aggggccctccctccatggcagccaggacaggactctca 100
>31190_ppy-mir-612:mirbase
Length = 96
Score = 161 bits (81), Expect = 1e-40
Identities = 94/97 (96%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 3 catctggaccctgctgggcagggcttctgagctccttagcactagcaggaggggctccag 62
|||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 1 catctggaccctgctggggagggcttcggagctccttagcactagcagg-ggggctccag 59
Query: 63 gggccctccctccatggcagccaggacaggactctca 99
|||||||||||||||||||||||||||||||||||||
Sbjct: 60 gggccctccctccatggcagccaggacaggactctca 96
>28053_mml-mir-612:mirbase
Length = 100
Score = 153 bits (77), Expect = 3e-38
Identities = 92/97 (94%)
Strand = Plus / Plus
Query: 3 catctggaccctgctgggcagggcttctgagctccttagcactagcaggaggggctccag 62
||||||||||| ||||| ||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 4 catctggaccccactggggagggcttctgagctcctcagcactggcaggaggggctccag 63
Query: 63 gggccctccctccatggcagccaggacaggactctca 99
|||||||||||||||||||||||||||||||||||||
Sbjct: 64 gggccctccctccatggcagccaggacaggactctca 100
