miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00959;mir-612;AANU01213855.1/10814-10715 9544:Macaca mulatta
           (rhesus monkey)
          Length = 100

 Score =  153 bits (77), Expect = 5e-37
 Identities = 92/97 (94%)
 Strand = Plus / Plus

                                                                       
Query: 3   catctggaccctgctgggcagggcttctgagctccttagcactagcaggaggggctccag 62
           |||||||||||  ||||| ||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 4   catctggaccccactggggagggcttctgagctcctcagcactggcaggaggggctccag 63

                                                
Query: 63  gggccctccctccatggcagccaggacaggactctca 99
           |||||||||||||||||||||||||||||||||||||
Sbjct: 64  gggccctccctccatggcagccaggacaggactctca 100




>RF00959;mir-612;ABDC01368197.1/2724-2822 30608:Microcebus murinus
          (gray mouse lemur)
          Length = 99

 Score = 46.1 bits (23), Expect = 8e-05
 Identities = 54/63 (85%), Gaps = 1/63 (1%)
 Strand = Plus / Plus

                                                                      
Query: 3  catctggaccctgctgggcaggg-cttctgagctccttagcactagcaggaggggctcca 61
          |||||||| | ||||||| |||| |||||||| |||| ||| || |||||||| ||||||
Sbjct: 4  catctggatcttgctggggaggggcttctgagttcctcagcgctggcaggaggtgctcca 63

             
Query: 62 ggg 64
          |||
Sbjct: 64 ggg 66