miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28930_hsa-mir-615:mirbase
Length = 96
Score = 163 bits (82), Expect = 3e-41
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 1 ctcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcgg 60
Query: 61 tccgagcctgggtctccctctt 82
||||||||||||||||||||||
Sbjct: 61 tccgagcctgggtctccctctt 82
>28931_hsa-mir-615:mirbase
Length = 96
Score = 163 bits (82), Expect = 3e-41
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 1 ctcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcgg 60
Query: 61 tccgagcctgggtctccctctt 82
||||||||||||||||||||||
Sbjct: 61 tccgagcctgggtctccctctt 82
>32224_mmu-mir-615:mirbase
Length = 92
Score = 161 bits (81), Expect = 1e-40
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 2 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 60
Query: 62 ccgagcctgggtctccctctt 82
|||||||||||||||||||||
Sbjct: 61 ccgagcctgggtctccctctt 81
>32225_mmu-mir-615:mirbase
Length = 92
Score = 161 bits (81), Expect = 1e-40
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 2 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 60
Query: 62 ccgagcctgggtctccctctt 82
|||||||||||||||||||||
Sbjct: 61 ccgagcctgggtctccctctt 81
>32963_rno-mir-615:mirbase
Length = 92
Score = 161 bits (81), Expect = 1e-40
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 2 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 60
Query: 62 ccgagcctgggtctccctctt 82
|||||||||||||||||||||
Sbjct: 61 ccgagcctgggtctccctctt 81
>33434_bta-mir-615:mirbase
Length = 93
Score = 161 bits (81), Expect = 1e-40
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 ctcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcgg 60
Query: 61 tccgagcctgggtctccctct 81
|||||||||||||||||||||
Sbjct: 61 tccgagcctgggtctccctct 81
>27242_eca-mir-615:mirbase
Length = 97
Score = 157 bits (79), Expect = 2e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 3 cgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggtc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 cgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggtc 63
Query: 63 cgagcctgggtctccctct 81
|||||||||||||||||||
Sbjct: 64 cgagcctgggtctccctct 82
>27243_eca-mir-615:mirbase
Length = 97
Score = 157 bits (79), Expect = 2e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 3 cgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggtc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 cgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggtc 63
Query: 63 cgagcctgggtctccctct 81
|||||||||||||||||||
Sbjct: 64 cgagcctgggtctccctct 82
>28054_mml-mir-615:mirbase
Length = 96
Score = 155 bits (78), Expect = 7e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 1 ctcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcgg 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcgggaggggcggaaggggggtccccggtgctcggatctcgagggtgcttattgttcgg 60
Query: 61 tccgagcctgggtctccctctt 82
||||||||||||||||||||||
Sbjct: 61 tccgagcctgggtctccctctt 82
>28055_mml-mir-615:mirbase
Length = 96
Score = 155 bits (78), Expect = 7e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 1 ctcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcgg 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcgggaggggcggaaggggggtccccggtgctcggatctcgagggtgcttattgttcgg 60
Query: 61 tccgagcctgggtctccctctt 82
||||||||||||||||||||||
Sbjct: 61 tccgagcctgggtctccctctt 82
>31193_ppy-mir-615:mirbase
Length = 96
Score = 147 bits (74), Expect = 2e-36
Identities = 80/82 (97%)
Strand = Plus / Plus
Query: 1 ctcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcgg 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcgggaggggcgggagggggttccccggtgctcggatctcgagggtgcttattgttcgg 60
Query: 61 tccgagcctgggtctccctctt 82
||||||||||||||||| ||||
Sbjct: 61 tccgagcctgggtctccgtctt 82
>31194_ppy-mir-615:mirbase
Length = 96
Score = 147 bits (74), Expect = 2e-36
Identities = 80/82 (97%)
Strand = Plus / Plus
Query: 1 ctcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcgg 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcgggaggggcgggagggggttccccggtgctcggatctcgagggtgcttattgttcgg 60
Query: 61 tccgagcctgggtctccctctt 82
||||||||||||||||| ||||
Sbjct: 61 tccgagcctgggtctccgtctt 82
>34124_ssc-mir-615:mirbase
Length = 88
Score = 147 bits (74), Expect = 2e-36
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 4 gggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggtcc 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggaggggcgggagggggctccccggtgctcggatctcgagggtgcttattgttcggtcc 60
Query: 64 gagcctgggtctccctct 81
||||||||||||||||||
Sbjct: 61 gagcctgggtctccctct 78
>26890_cfa-mir-615:mirbase
Length = 85
Score = 127 bits (64), Expect = 2e-30
Identities = 77/80 (96%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 2 tcgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggt 61
|||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 1 tcgggaggggcgggaggggggtccccggagctcgg-tctcgagggtgcttattgttcggt 59
Query: 62 ccgagcctgggtctccctct 81
||||||| ||||||||||||
Sbjct: 60 ccgagcccgggtctccctct 79
