miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28933_hsa-mir-617:mirbase
Length = 97
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 catcataaggagcctagacttcccatttgaaggtggccatttcctaccaccttcaaatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catcataaggagcctagacttcccatttgaaggtggccatttcctaccaccttcaaatgg 60
Query: 61 taagtccaggctccttctgattcaataaatgaggag 96
||||||||||||||||||||||||||||||||||||
Sbjct: 61 taagtccaggctccttctgattcaataaatgaggag 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 47 ccaccttcaaatggtaagtccaggctccttctgat 81
|||||||||||||| ||||| ||||||||| ||||
Sbjct: 36 ccaccttcaaatgggaagtctaggctccttatgat 2
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 2 atcataaggagcctagacttcccatttgaaggtgg 36
|||| ||||||||| ||||| ||||||||||||||
Sbjct: 81 atcagaaggagcctggacttaccatttgaaggtgg 47
>31196_ppy-mir-617:mirbase
Length = 97
Score = 174 bits (88), Expect = 7e-45
Identities = 94/96 (97%)
Strand = Plus / Plus
Query: 1 catcataaggagcctagacttcccatttgaaggtggccatttcctaccaccttcaaatgg 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catcataaggagcctggacttcccatttgaaggtggccatttcctaccaccttcaaatgg 60
Query: 61 taagtccaggctccttctgattcaataaatgaggag 96
||||||||||||| ||||||||||||||||||||||
Sbjct: 61 taagtccaggctctttctgattcaataaatgaggag 96
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 47 ccaccttcaaatggtaagtccaggctccttctgat 81
|||||||||||||| ||||||||||||||| ||||
Sbjct: 36 ccaccttcaaatgggaagtccaggctccttatgat 2
