miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28935_hsa-mir-619:mirbase
Length = 99
Score = 178 bits (90), Expect = 5e-46
Identities = 96/98 (97%)
Strand = Plus / Plus
Query: 1 cgcccacctcagcctcccaaaatgctgggattacaggcatgagccaccgtggtcgaccat 60
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 1 cgcccacctcagcctcccaaaatgctgggattacaggcatgagccactgcggtcgaccat 60
Query: 61 gacctggacatgtttgtgcccagtactgtcagtttgca 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gacctggacatgtttgtgcccagtactgtcagtttgca 98
>31198_ppy-mir-619:mirbase
Length = 99
Score = 170 bits (86), Expect = 1e-43
Identities = 95/98 (96%)
Strand = Plus / Plus
Query: 1 cgcccacctcagcctcccaaaatgctgggattacaggcatgagccaccgtggtcgaccat 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 cgcccacctcagcctcccaaaatgctgggattacaggcatgagccaccgcggtcgaccat 60
Query: 61 gacctggacatgtttgtgcccagtactgtcagtttgca 98
||||||||||||||||||||||| ||||||||| ||||
Sbjct: 61 gacctggacatgtttgtgcccaggactgtcagtctgca 98
>28058_mml-mir-619:mirbase
Length = 99
Score = 139 bits (70), Expect = 4e-34
Identities = 91/98 (92%)
Strand = Plus / Plus
Query: 1 cgcccacctcagcctcccaaaatgctgggattacaggcatgagccaccgtggtcgaccat 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 cgcccacctcagcctcccaaaatgctgggattacaggcatgagccaccgcagtcgaccat 60
Query: 61 gacctggacatgtttgtgcccagtactgtcagtttgca 98
|| ||||||||||||||||| | | ||||||||||||
Sbjct: 61 gatctggacatgtttgtgcctgggattgtcagtttgca 98
>29310_hsa-mir-3159:mirbase
Length = 74
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 17 ccaaaatgctgggattacaggcatgagccac 47
|||||||||||||||||||||| ||||||||
Sbjct: 74 ccaaaatgctgggattacaggcgtgagccac 44
>29505_hsa-mir-3929:mirbase
Length = 55
Score = 46.1 bits (23), Expect = 5e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 9 tcagcctcccaaaatgctgggattacaggcatgagccac 47
||||||||||||| |||||||||||| || ||||||||
Sbjct: 40 tcagcctcccaaagtgctgggattactggtgtgagccac 2
>30034_hsa-mir-5095:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 24 gctgggattacaggcatgagccaccg 49
||||||||||||||| ||||||||||
Sbjct: 88 gctgggattacaggcgtgagccaccg 63
