miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00968;mir-626;ABGA01087931.1/13445-13538 9601:Pongo abelii
(Sumatran orangutan)
Length = 94
Score = 137 bits (69), Expect = 3e-32
Identities = 84/89 (94%)
Strand = Plus / Plus
Query: 1 ctgatatatttgtcttatttgagagctgaggagtatttttatgcaatctgaatgatctca 60
|||||| ||||||| | |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ctgatacatttgtcgtgtttgtgagctgaggagtatttttatgcaatctgaatgatctca 61
Query: 61 gctgtctgaaaatgtcttcaattttaaag 89
|||||||| ||||||||||||||||||||
Sbjct: 62 gctgtctgcaaatgtcttcaattttaaag 90
>RF00968;mir-626;AANU01297252.1/2538-2632 9544:Macaca mulatta
(rhesus monkey)
Length = 95
Score = 103 bits (52), Expect = 4e-22
Identities = 83/92 (90%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 3 gatatatttgtcttatttgagagctgaggagt-atttttatgcaatctgaatgatctcag 61
||||| |||||||||||| ||||||||| || ||||||||||| ||| |||||||||||
Sbjct: 4 gatatctttgtcttatttctgagctgaggggttatttttatgcagtctaaatgatctcag 63
Query: 62 ctgtctgaaaatgtcttcaattttaaaggctt 93
||||| |||||||||||||| |||||||||||
Sbjct: 64 ctgtccgaaaatgtcttcaagtttaaaggctt 95
>RF00968;mir-626;ABRP01236309.1/6226-6323 132908:Pteropus vampyrus
(large flying fox)
Length = 98
Score = 46.1 bits (23), Expect = 8e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 47 tctgaatgatctcagctgtctgaaaatgtcttcaattttaaaggctt 93
||||||| |||||||||||||||||| ||||| |||| |||||||
Sbjct: 52 tctgaattctctcagctgtctgaaaataccttcagttttgaaggctt 98
