miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28968_hsa-mir-650:mirbase
Length = 96
Score = 172 bits (87), Expect = 3e-44
Identities = 93/95 (97%)
Strand = Plus / Plus
Query: 1 agtgctggggtcttaggaggcagcgctctcaggacgtcaccaccatggccagggctctgc 60
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2 agtgctggggtctcaggaggcagcgctctcaggacgtcaccaccatggcctgggctctgc 61
Query: 61 tcctcctcaccctcctcactcagggcacaggtgat 95
|||||||||||||||||||||||||||||||||||
Sbjct: 62 tcctcctcaccctcctcactcagggcacaggtgat 96
>28078_mml-mir-650a-1:mirbase
Length = 95
Score = 147 bits (74), Expect = 2e-36
Identities = 89/94 (94%)
Strand = Plus / Plus
Query: 1 agtgctggggtcttaggaggcagcgctctcaggacgtcaccaccatggccagggctctgc 60
||||||||| ||| |||||||||||||||||||||||| ||||||||| | |||||||||
Sbjct: 2 agtgctgggatctcaggaggcagcgctctcaggacgtctccaccatggtctgggctctgc 61
Query: 61 tcctcctcaccctcctcactcagggcacaggtga 94
||||||||||||||||||||||||||||||||||
Sbjct: 62 tcctcctcaccctcctcactcagggcacaggtga 95
>28079_mml-mir-650a-2:mirbase
Length = 95
Score = 139 bits (70), Expect = 4e-34
Identities = 88/94 (93%)
Strand = Plus / Plus
Query: 1 agtgctggggtcttaggaggcagcgctctcaggacgtcaccaccatggccagggctctgc 60
||||||||| ||| ||||||||||||||||||||| || ||||||||| | |||||||||
Sbjct: 2 agtgctgggatctcaggaggcagcgctctcaggacttctccaccatggtctgggctctgc 61
Query: 61 tcctcctcaccctcctcactcagggcacaggtga 94
||||||||||||||||||||||||||||||||||
Sbjct: 62 tcctcctcaccctcctcactcagggcacaggtga 95
>31220_ppy-mir-650:mirbase
Length = 95
Score = 139 bits (70), Expect = 4e-34
Identities = 88/94 (93%)
Strand = Plus / Plus
Query: 1 agtgctggggtcttaggaggcagcgctctcaggacgtcaccaccatggccagggctctgc 60
||||||||||||| |||||||||| ||||| ||||||| ||||||||||| || ||||||
Sbjct: 2 agtgctggggtctcaggaggcagctctctcgggacgtctccaccatggcctggtctctgc 61
Query: 61 tcctcctcaccctcctcactcagggcacaggtga 94
||||||||||||||||||||||||||||||||||
Sbjct: 62 tcctcctcaccctcctcactcagggcacaggtga 95
>28080_mml-mir-650b:mirbase
Length = 95
Score = 131 bits (66), Expect = 1e-31
Identities = 87/94 (92%)
Strand = Plus / Plus
Query: 1 agtgctggggtcttaggaggcagcgctctcaggacgtcaccaccatggccagggctctgc 60
||||||||||||| |||||||||||||||| |||| || ||||||||||| ||| |||||
Sbjct: 2 agtgctggggtctcaggaggcagcgctctcgggacatctccaccatggcctgggatctgc 61
Query: 61 tcctcctcaccctcctcactcagggcacaggtga 94
||||| ||||||||||||||||||||||||||||
Sbjct: 62 tcctcttcaccctcctcactcagggcacaggtga 95
>28082_mml-mir-650d:mirbase
Length = 92
Score = 109 bits (55), Expect = 4e-25
Identities = 82/91 (90%)
Strand = Plus / Plus
Query: 1 agtgctggggtcttaggaggcagcgctctcaggacgtcaccaccatggccagggctctgc 60
||||||||||||| ||||| ||| ||| || ||||||| ||||||||||| |||||||||
Sbjct: 2 agtgctggggtctcaggagacagtgctgtcgggacgtctccaccatggcctgggctctgc 61
Query: 61 tcctcctcaccctcctcactcagggcacagg 91
||||||||||||| |||||||| ||||||||
Sbjct: 62 tcctcctcacccttctcactcaaggcacagg 92
>28081_mml-mir-650c:mirbase
Length = 91
Score = 97.6 bits (49), Expect = 1e-21
Identities = 83/94 (88%), Gaps = 4/94 (4%)
Strand = Plus / Plus
Query: 1 agtgctggggtcttaggaggcagcgctctcaggacgtcaccaccatggccagggctctgc 60
||||||||||| | |||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 2 agtgctggggtgtcaggaggcagcgctctcag----tctccaccatggcctgggctctgc 57
Query: 61 tcctcctcaccctcctcactcagggcacaggtga 94
|||||||||| ||||||||||| ||||| |||||
Sbjct: 58 tcctcctcactctcctcactcatggcacgggtga 91
