miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>29034_hsa-mir-935:mirbase
Length = 91
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 gcgggggcgcgggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gcgggggcgcgggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagtt 61
Query: 61 accgcttccgctaccgccgccgctcccgct 90
||||||||||||||||||||||||||||||
Sbjct: 62 accgcttccgctaccgccgccgctcccgct 91
>33465_bta-mir-935:mirbase
Length = 91
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 gcgggggcgcgggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gcgggggcgcgggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagtt 61
Query: 61 accgcttccgctaccgccgccgctcccgct 90
||||||||||||||||||||||||||||||
Sbjct: 62 accgcttccgctaccgccgccgctcccgct 91
>33010_rno-mir-935:mirbase
Length = 91
Score = 170 bits (86), Expect = 1e-43
Identities = 89/90 (98%)
Strand = Plus / Plus
Query: 1 gcgggggcgcgggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagtt 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gcggcggcgcgggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagtt 61
Query: 61 accgcttccgctaccgccgccgctcccgct 90
||||||||||||||||||||||||||||||
Sbjct: 62 accgcttccgctaccgccgccgctcccgct 91
>34139_ssc-mir-935:mirbase
Length = 80
Score = 151 bits (76), Expect = 1e-37
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 6 ggcgcgggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagttaccgc 65
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcgcaggcggcagtggcgggagcggcccctcggccatcctccgtctgcccagttaccgc 60
Query: 66 ttccgctaccgccgccgctc 85
||||||||||||||||||||
Sbjct: 61 ttccgctaccgccgccgctc 80
