miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00964;mir-938;CABD01049476.1/7197-7279 9595:Gorilla gorilla
          gorilla (Western lowland gorilla)
          Length = 83

 Score =  137 bits (69), Expect = 2e-32
 Identities = 78/81 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1  gaaggtgtaccatgtgcccttaaaggtgaacccagtgtaccttcatgaaccatggtacac 60
          ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 1  gaaggtgtaccatgtgcccttaaaggtgaacccagtgcaccttcatgaaccgtggtacac 60

                               
Query: 61 ctttaagaacttggtatgcct 81
          ||||||||||||| |||||||
Sbjct: 61 ctttaagaacttgatatgcct 81




>RF00964;mir-938;AANU01172051.1/35182-35264 9544:Macaca mulatta
          (rhesus monkey)
          Length = 83

 Score = 85.7 bits (43), Expect = 8e-17
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                      
Query: 5  gtgtaccatgtgcccttaaaggtgaacccagtgtaccttcatgaaccatggtacaccttt 64
          ||||||||||||| ||||||| |||| || ||| ||||||||||||  ||||||||||||
Sbjct: 5  gtgtaccatgtgcacttaaagatgaagccggtgcaccttcatgaactgtggtacaccttt 64

                     
Query: 65 aagaacttggt 75
          |||||||||||
Sbjct: 65 aagaacttggt 75