miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>29039_hsa-mir-940:mirbase
Length = 94
Score = 168 bits (85), Expect = 4e-43
Identities = 91/93 (97%)
Strand = Plus / Plus
Query: 1 tgaggtgtgggcccggcccctggagcggggcctgggcagccccgtgtgatgaggaaggaa 60
|||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 2 tgaggtgtgggcccggccccaggagcggggcctgggcagccccgtgtgttgaggaaggaa 61
Query: 61 ggcagggcccccgctccccgggcctgaccccac 93
|||||||||||||||||||||||||||||||||
Sbjct: 62 ggcagggcccccgctccccgggcctgaccccac 94
>28150_mml-mir-940:mirbase
Length = 94
Score = 163 bits (82), Expect = 3e-41
Identities = 88/90 (97%)
Strand = Plus / Plus
Query: 4 ggtgtgggcccggcccctggagcggggcctgggcagccccgtgtgatgaggaaggaaggc 63
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5 ggtgtgggcccggccccaggagcggggcctgggcagccccgtgtgttgaggaaggaaggc 64
Query: 64 agggcccccgctccccgggcctgaccccac 93
||||||||||||||||||||||||||||||
Sbjct: 65 agggcccccgctccccgggcctgaccccac 94
>33466_bta-mir-940:mirbase
Length = 93
Score = 105 bits (53), Expect = 5e-24
Identities = 80/89 (89%)
Strand = Plus / Plus
Query: 4 ggtgtgggcccggcccctggagcggggcctgggcagccccgtgtgatgaggaaggaaggc 63
||||||||| |||||| |||| |||||||||||| ||| ||||| ||||||||||||||
Sbjct: 5 ggtgtgggctgggccccaggagtggggcctgggcaaccctgtgtgttgaggaaggaaggc 64
Query: 64 agggcccccgctccccgggcctgacccca 92
||||||||||||| ||||||||||||||
Sbjct: 65 tgggcccccgctccgcgggcctgacccca 93
