miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>31276_ppy-mir-943:mirbase
          Length = 96

 Score =  163 bits (82), Expect = 3e-41
 Identities = 94/97 (96%), Gaps = 2/97 (2%)
 Strand = Plus / Plus

                                                                      
Query: 1  gggacgttctgggctcagagggggtgggggacgtttgccggtcactgctgctggcgccct 60
          |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 1  gggacgttctgggctcagagggggtgggggacgtttgccggtcactgctgctg--gccct 58

                                               
Query: 61 gactgttgccgtcctccagccccactcaaaggcatcc 97
          ||||||||| |||||||||||||||||||||||||||
Sbjct: 59 gactgttgctgtcctccagccccactcaaaggcatcc 95




>29045_hsa-mir-943:mirbase
          Length = 94

 Score =  153 bits (77), Expect = 3e-38
 Identities = 77/77 (100%)
 Strand = Plus / Plus

                                                                      
Query: 21 ggggtgggggacgtttgccggtcactgctgctggcgccctgactgttgccgtcctccagc 80
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 ggggtgggggacgtttgccggtcactgctgctggcgccctgactgttgccgtcctccagc 76

                           
Query: 81 cccactcaaaggcatcc 97
          |||||||||||||||||
Sbjct: 77 cccactcaaaggcatcc 93