miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>29046_hsa-mir-944:mirbase
Length = 88
Score = 172 bits (87), Expect = 3e-44
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 1 ttccagacacatctcatctgatatacaatattttcttaaattgtataaagagaaattatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ttccagacacatctcatctgatatacaatattttcttaaattgtataaagagaaattatt 61
Query: 61 gtacatcggatgagctgtgtctgggat 87
|||||||||||||||||||||||||||
Sbjct: 62 gtacatcggatgagctgtgtctgggat 88
>31277_ppy-mir-944:mirbase
Length = 88
Score = 157 bits (79), Expect = 2e-39
Identities = 85/87 (97%)
Strand = Plus / Plus
Query: 1 ttccagacacatctcatctgatatacaatattttcttaaattgtataaagagaaattatt 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2 ttccagacacatctcatctgatctacaatattttcttaaattgtataaagagaaattatt 61
Query: 61 gtacatcggatgagctgtgtctgggat 87
||||||| |||||||||||||||||||
Sbjct: 62 gtacatcagatgagctgtgtctgggat 88
>28152_mml-mir-944:mirbase
Length = 88
Score = 137 bits (69), Expect = 1e-33
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 1 ttccagacacatctcatctgatatacaatattttcttaaattgtataaagagaaattatt 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2 ttccagacacatctcatctgatatacaatattttcttaaattgtaaaaagagaaattatt 61
Query: 61 gtacatcggatgagctgtgtctggg 85
||| ||| |||||| ||||||||||
Sbjct: 62 gtatatcagatgagatgtgtctggg 86
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 3 ccagacacatctcatctgatatacaatattttct 36
|||||||||||||||||||||||||||| |||||
Sbjct: 85 ccagacacatctcatctgatatacaataatttct 52
