miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>29048_hsa-mir-1179:mirbase
Length = 91
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 gctggaaaggaagaagcattctttcattggttggtgtgtattgccttgtcaaccaataag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gctggaaaggaagaagcattctttcattggttggtgtgtattgccttgtcaaccaataag 61
Query: 61 aggatgccatttatccttttctgactagct 90
||||||||||||||||||||||||||||||
Sbjct: 62 aggatgccatttatccttttctgactagct 91
>31279_ppy-mir-1179:mirbase
Length = 91
Score = 170 bits (86), Expect = 1e-43
Identities = 89/90 (98%)
Strand = Plus / Plus
Query: 1 gctggaaaggaagaagcattctttcattggttggtgtgtattgccttgtcaaccaataag 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2 gctggaaaggaagaagcattctttcattggctggtgtgtattgccttgtcaaccaataag 61
Query: 61 aggatgccatttatccttttctgactagct 90
||||||||||||||||||||||||||||||
Sbjct: 62 aggatgccatttatccttttctgactagct 91
>27281_eca-mir-1179:mirbase
Length = 86
Score = 139 bits (70), Expect = 4e-34
Identities = 82/86 (95%)
Strand = Plus / Plus
Query: 5 gaaaggaagaagcattctttcattggttggtgtgtattgccttgtcaaccaataagagga 64
|||||| ||||||||||||||||||||||||||||||||||| |||| ||||| ||||||
Sbjct: 1 gaaagggagaagcattctttcattggttggtgtgtattgcctcgtcagccaatcagagga 60
Query: 65 tgccatttatccttttctgactagct 90
||||||||||||||||||||||||||
Sbjct: 61 tgccatttatccttttctgactagct 86
>33467_bta-mir-1179:mirbase
Length = 90
Score = 129 bits (65), Expect = 4e-31
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 9 ggaagaagcattctttcattggttggtgtgtattgccttgtcaaccaataagaggatgcc 68
||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||
Sbjct: 10 ggaagaagcattctttcattggttggtgtatgttgccttgtcaaccaatcagaggatgcc 69
Query: 69 atttatccttttctgactagc 89
|||||||||||||| ||||||
Sbjct: 70 atttatccttttctaactagc 90
