miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00946;mir-1225;AANU01106525.1/745-656 9544:Macaca mulatta
(rhesus monkey)
Length = 90
Score = 135 bits (68), Expect = 1e-31
Identities = 82/89 (92%)
Strand = Plus / Plus
Query: 1 gtgggtacggcccagtnnnnnnnagagggacacgccctgggctctgcccagggtgcagcc 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgggtacggcccagtgggggggagagggacacgccctgggctctgcccagggtgcagcc 60
Query: 61 ggactgactgagcccctgtgccgccccca 89
|||||||||||||||||||||||||||||
Sbjct: 61 ggactgactgagcccctgtgccgccccca 89
>RF00946;mir-1225;ABRO01110593.1/5760-5850 10020:Dipodomys ordii
(Ord's kangaroo rat)
Length = 91
Score = 67.9 bits (34), Expect = 2e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 52 ggtgcagccggactgactgagcccctgtgccgccccca 89
||||||||||||||||| ||||||||||||||||||||
Sbjct: 53 ggtgcagccggactgaccgagcccctgtgccgccccca 90
>RF00946;mir-1225;AAKN02007402.1/12328-12238 10141:Cavia porcellus
(domestic guinea pig)
Length = 91
Score = 63.9 bits (32), Expect = 3e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 46 gcccagggtgcagccggactgactgagcccctgtgccgccccca 89
||||||||||||| | ||||||| ||||||||||||||||||||
Sbjct: 47 gcccagggtgcagtcagactgacagagcccctgtgccgccccca 90
