miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>29111_hsa-mir-1263:mirbase
Length = 86
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 1 ctaccccaaaatatggtaccctggcatactgagtattttaatactggcatactcagtatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctaccccaaaatatggtaccctggcatactgagtattttaatactggcatactcagtatg 60
Query: 61 ccatggtgccatattttggggtagc 85
||||| |||||||||||||||||||
Sbjct: 61 ccatgttgccatattttggggtagc 85
Score = 63.9 bits (32), Expect = 2e-11
Identities = 71/84 (84%)
Strand = Plus / Minus
Query: 1 ctaccccaaaatatggtaccctggcatactgagtattttaatactggcatactcagtatg 60
|||||||||||||||| | | ||||||||||||||| | || | ||||||||||||
Sbjct: 84 ctaccccaaaatatggcaacatggcatactgagtatgccagtattaaaatactcagtatg 25
Query: 61 ccatggtgccatattttggggtag 84
||| ||| ||||||||||||||||
Sbjct: 24 ccagggtaccatattttggggtag 1
>31323_ppy-mir-1263:mirbase
Length = 84
Score = 143 bits (72), Expect = 2e-35
Identities = 81/84 (96%)
Strand = Plus / Plus
Query: 1 ctaccccaaaatatggtaccctggcatactgagtattttaatactggcatactcagtatg 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 ctaccccaaaatatggtaccctggcatactgagtattttaatacgggcatactcagtata 60
Query: 61 ccatggtgccatattttggggtag 84
|||| |||||||||||||||||||
Sbjct: 61 ccatagtgccatattttggggtag 84
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 49 atactcagtatgccatggtgccatattttggggtag 84
||||||||||||||| ||| ||||||||||||||||
Sbjct: 36 atactcagtatgccagggtaccatattttggggtag 1
