miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>29141_hsa-mir-1285-1:mirbase
Length = 84
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 tgtagagataggatctcactttgttgcccaggctggtctcaaactcctggtctgggcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtagagataggatctcactttgttgcccaggctggtctcaaactcctggtctgggcaac 60
Query: 61 aaagtgagaccttatctctacaa 83
|||||||||||||||||||||||
Sbjct: 61 aaagtgagaccttatctctacaa 83
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 52 ctgggcaacaaagtgagaccttatctctaca 82
|||||||||||||||||| | ||||||||||
Sbjct: 31 ctgggcaacaaagtgagatcctatctctaca 1
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 1 tgtagagataggatctcactttgttgcccag 31
|||||||||| | ||||||||||||||||||
Sbjct: 82 tgtagagataaggtctcactttgttgcccag 52
>31341_ppy-mir-1285a:mirbase
Length = 84
Score = 141 bits (71), Expect = 9e-35
Identities = 80/83 (96%)
Strand = Plus / Plus
Query: 1 tgtagagataggatctcactttgttgcccaggctggtctcaaactcctggtctgggcaac 60
|||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 1 tgtagagatagggtctcactttattgcccaggctggtctcaaactcctggtctaggcaac 60
Query: 61 aaagtgagaccttatctctacaa 83
|||||||||||||||||||||||
Sbjct: 61 aaagtgagaccttatctctacaa 83
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 52 ctgggcaacaaagtgagaccttatctctaca 82
|||||||| ||||||||||| ||||||||||
Sbjct: 31 ctgggcaataaagtgagaccctatctctaca 1
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1 tgtagagataggatctcactttgttgcc 28
|||||||||| | |||||||||||||||
Sbjct: 82 tgtagagataaggtctcactttgttgcc 55
>29142_hsa-mir-1285-2:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 14 tctcactttgttgcccaggctggtctcaaa 43
|||||||||||||||||| ||||||||||
Sbjct: 70 tctcactttgttgcccagattggtctcaaa 41
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 51 tctgggcaacaaagtgagacct 72
||||||||||||||||||||||
Sbjct: 52 tctgggcaacaaagtgagacct 73
>31342_ppy-mir-1285b:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 14 tctcactttgttgcccaggctggtctcaaa 43
|||||||||||||||||| ||||||||||
Sbjct: 70 tctcactttgttgcccagattggtctcaaa 41
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 51 tctgggcaacaaagtgagacct 72
||||||||||||||||||||||
Sbjct: 52 tctgggcaacaaagtgagacct 73
>30035_hsa-mir-5096:mirbase
Length = 70
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 caggctggtctcaaactcctg 49
|||||||||||||||||||||
Sbjct: 29 caggctggtctcaaactcctg 49
