miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00017;Metazoa_SRP;ABGA01278641.1/23993-23702 9601:Pongo abelii
(Sumatran orangutan)
Length = 292
Score = 73.8 bits (37), Expect = 3e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 1 tgtagagataggatctcactttgttgcccaggctggtctcaaactcctggtct 53
|||||||| ||| ||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 119 tgtagagacagggtctcactgtgttgcccaggctggtctcaaactcctagtct 67
>RF00017;Metazoa_SRP;CABD01200338.1/3014-2727 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 288
Score = 73.8 bits (37), Expect = 3e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 1 tgtagagataggatctcactttgttgcccaggctggtctcaaactcctggtct 53
|||||||| ||| ||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 119 tgtagagacagggtctcactatgttgcccaggctggtctcaaactcctagtct 67
>RF00017;Metazoa_SRP;ABGA01319971.1/6088-5802 9601:Pongo abelii
(Sumatran orangutan)
Length = 287
Score = 65.9 bits (33), Expect = 7e-11
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 12 gatctcactttgttgcccaggctggtctcaaactcct 48
||||||||| |||||||||||||||||||||||||||
Sbjct: 278 gatctcactatgttgcccaggctggtctcaaactcct 242
>RF00017;Metazoa_SRP;AADA01264996.1/2243-1952 9598:Pan troglodytes
(chimpanzee)
Length = 292
Score = 65.9 bits (33), Expect = 7e-11
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 1 tgtagagataggatctcactttgttgcccaggctggtctcaaactcctggtct 53
|||||||| ||| |||| || ||||||||||||||||||||||||||| ||||
Sbjct: 119 tgtagagacagggtctcgctatgttgcccaggctggtctcaaactcctagtct 67
>RF00017;Metazoa_SRP;ABSL01244247.1/6253-6544 9606:Homo sapiens
(human)
Length = 292
Score = 65.9 bits (33), Expect = 7e-11
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 1 tgtagagataggatctcactttgttgcccaggctggtctcaaactcctggtct 53
|||||||| ||| |||| || ||||||||||||||||||||||||||| ||||
Sbjct: 119 tgtagagacagggtctcgctatgttgcccaggctggtctcaaactcctagtct 67
>RF00017;Metazoa_SRP;AADA01264316.1/5557-5281 9598:Pan troglodytes
(chimpanzee)
Length = 277
Score = 63.9 bits (32), Expect = 3e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctggtctcaaactcctgg 50
||||||| || | ||||| |||||||||||||||||||||||||||||
Sbjct: 277 tagagatggggtttcactatgttgcccaggctggtctcaaactcctgg 230
>RF00017;Metazoa_SRP;AADA01277546.1/7411-7694 9598:Pan troglodytes
(chimpanzee)
Length = 284
Score = 60.0 bits (30), Expect = 5e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 16 tcactttgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||||||||
Sbjct: 104 tcactatgttgcccaggctggtctcaaactcctg 71
>RF00017;Metazoa_SRP;AACZ02181236.1/3995-3712 9598:Pan troglodytes
(chimpanzee)
Length = 284
Score = 60.0 bits (30), Expect = 5e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 16 tcactttgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||||||||
Sbjct: 104 tcactatgttgcccaggctggtctcaaactcctg 71
>RF00017;Metazoa_SRP;ABSL01071167.1/4313-4030 9606:Homo sapiens
(human)
Length = 284
Score = 60.0 bits (30), Expect = 5e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 16 tcactttgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||||||||
Sbjct: 104 tcactatgttgcccaggctggtctcaaactcctg 71
>RF00017;Metazoa_SRP;ABGA01004371.1/4601-4876 9601:Pongo abelii
(Sumatran orangutan)
Length = 276
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctgg 50
|||||||||||||||||||||||||||||
Sbjct: 257 tgttgcccaggctggtctcaaactcctgg 229
>RF00017;Metazoa_SRP;ABGA01292638.1/11639-11354 9601:Pongo abelii
(Sumatran orangutan)
Length = 286
Score = 58.0 bits (29), Expect = 2e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 4 agagataggatctcactttgttgcccaggctggtctcaaactcct 48
||||| ||||||||| |||||||||||||||||||| |||||||
Sbjct: 285 agagacaggatctcattttgttgcccaggctggtcttgaactcct 241
>RF00017;Metazoa_SRP;ABDC01404285.1/607-316 30608:Microcebus murinus
(gray mouse lemur)
Length = 292
Score = 56.0 bits (28), Expect = 7e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 19 ctttgttgcccaggctggtctcaaactcctgg 50
||||||||||||||||||||| ||||||||||
Sbjct: 278 ctttgttgcccaggctggtcttaaactcctgg 247
>RF00017;Metazoa_SRP;ABGA01231613.1/858-1155 9601:Pongo abelii
(Sumatran orangutan)
Length = 298
Score = 56.0 bits (28), Expect = 7e-08
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||||||||||||||||||||||||||
Sbjct: 279 tgttgcccaggctggtctcaaactcctg 252
>RF00017;Metazoa_SRP;ABGA01386025.1/3099-2818 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 56.0 bits (28), Expect = 7e-08
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 2 gtagagataggatctcactttgttgcccaggctggtctcaaactcctg 49
||||||| ||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 118 gtagagacaggatttcaccatgttggccaggctggtctcaaactcctg 71
>RF00017;Metazoa_SRP;ABDC01046245.1/471-189 30608:Microcebus murinus
(gray mouse lemur)
Length = 283
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 11 ggatctcactttgttgcccaggctggtctcaaactcctg 49
|||||||||| |||| |||||||||| ||||||||||||
Sbjct: 275 ggatctcactatgttacccaggctggactcaaactcctg 237
>RF00017;Metazoa_SRP;AACZ02112558.1/5910-6203 9598:Pan troglodytes
(chimpanzee)
Length = 294
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 24 ttgcccaggctggtctcaaactcctgg 50
|||||||||||||||||||||||||||
Sbjct: 273 ttgcccaggctggtctcaaactcctgg 247
>RF00017;Metazoa_SRP;AADD01159520.1/9861-9582 9606:Homo sapiens
(human)
Length = 280
Score = 54.0 bits (27), Expect = 3e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctggtctcaaactcctg 49
|||||| ||| | ||||| ||||| ||||||||||||||||||||||
Sbjct: 116 tagagacagggtttcactatgttggccaggctggtctcaaactcctg 70
>RF00017;Metazoa_SRP;AL358612.9/35723-35431 9606:Homo sapiens
(human)
Length = 293
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 24 ttgcccaggctggtctcaaactcctgg 50
|||||||||||||||||||||||||||
Sbjct: 272 ttgcccaggctggtctcaaactcctgg 246
>RF00017;Metazoa_SRP;CABD01427964.2/1790-1511 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 280
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 14 tctcactttgttgcccaggctggtctcaaactcct 48
||||||| |||||||||||||||||| ||||||||
Sbjct: 268 tctcactctgttgcccaggctggtctaaaactcct 234
>RF00017;Metazoa_SRP;ABDC01398661.1/4360-4648 30608:Microcebus
murinus (gray mouse lemur)
Length = 289
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 25 tgcccaggctggtctcaaactcctgg 50
||||||||||||||||||||||||||
Sbjct: 267 tgcccaggctggtctcaaactcctgg 242
>RF00017;Metazoa_SRP;ABRT010176367.1/1580-1837 9478:Tarsius syrichta
(Philippine tarsier)
Length = 258
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 50 gtctgggcaacaaagtgagaccttatctct 79
|||||||||||| |||||||||||||||||
Sbjct: 228 gtctgggcaacatagtgagaccttatctct 257
>RF00017;Metazoa_SRP;ABRT010397888.1/2661-2962 9478:Tarsius syrichta
(Philippine tarsier)
Length = 302
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctgg 36
|||||||||||||| ||| |||||||||||||||
Sbjct: 302 tagagataggatcttactctgttgcccaggctgg 269
>RF00017;Metazoa_SRP;AADB02073411.1/553-280 9606:Homo sapiens
(human)
Length = 274
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 24 ttgcccaggctggtctcaaactcctg 49
||||||||||||||||||||||||||
Sbjct: 253 ttgcccaggctggtctcaaactcctg 228
>RF00017;Metazoa_SRP;ABSL01069455.1/79887-79593 9606:Homo sapiens
(human)
Length = 295
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctgg 36
|||||| ||| |||||||||||||||||||||||
Sbjct: 295 tagagacagggtctcactttgttgcccaggctgg 262
>RF00017;Metazoa_SRP;AANU01236820.1/8882-8535 9544:Macaca mulatta
(rhesus monkey)
Length = 348
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctgg 36
|||||||||| ||||||| |||||||||||||||
Sbjct: 348 tagagatagggtctcactatgttgcccaggctgg 315
>RF00017;Metazoa_SRP;AAQR01482423.1/1376-1081 30611:Otolemur
garnettii (small-eared galago)
Length = 296
Score = 50.1 bits (25), Expect = 4e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 4 agagataggatctcactttgttgcccaggctgg 36
|||||| |||||||||| |||||||||||||||
Sbjct: 295 agagatgggatctcactatgttgcccaggctgg 263
>RF00017;Metazoa_SRP;ABDC01030912.1/8164-8450 30608:Microcebus
murinus (gray mouse lemur)
Length = 287
Score = 50.1 bits (25), Expect = 4e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctgg 50
|||||||||||||| ||||||||||||||
Sbjct: 268 tgttgcccaggctgttctcaaactcctgg 240
>RF00017;Metazoa_SRP;ABDC01265231.1/4830-4538 30608:Microcebus
murinus (gray mouse lemur)
Length = 293
Score = 50.1 bits (25), Expect = 4e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 12 gatctcactttgttgcccaggctggtctcaaactcct 48
||||||||| || |||||||||||| |||||||||||
Sbjct: 284 gatctcactgtgctgcccaggctggactcaaactcct 248
>RF00017;Metazoa_SRP;AADA01037309.1/12378-12102 9598:Pan troglodytes
(chimpanzee)
Length = 277
Score = 50.1 bits (25), Expect = 4e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 4 agagataggatctcactttgttgcccaggctgg 36
||||||||| ||||||| |||||||||||||||
Sbjct: 276 agagatagggtctcactgtgttgcccaggctgg 244
>RF00017;Metazoa_SRP;AC092068.2/27193-27483 9606:Homo sapiens
(human)
Length = 291
Score = 50.1 bits (25), Expect = 4e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 14 tctcactttgttgcccaggctggtctcaaactcctgg 50
||||||| |||| ||||||||||||| ||||||||||
Sbjct: 279 tctcactatgttacccaggctggtctgaaactcctgg 243
>RF00017;Metazoa_SRP;ABBA01022271.1/49025-49322 9606:Homo sapiens
(human)
Length = 298
Score = 50.1 bits (25), Expect = 4e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctgg 50
||||||||||||||||||||||| |||||
Sbjct: 98 tgttgcccaggctggtctcaaacccctgg 70
>RF00017;Metazoa_SRP;AADB02328392.1/351-633 9606:Homo sapiens
(human)
Length = 283
Score = 50.1 bits (25), Expect = 4e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctgg 50
||||| |||||||||||||||||||||||
Sbjct: 98 tgttggccaggctggtctcaaactcctgg 70
>RF00017;Metazoa_SRP;AADC01139096.1/84569-84843 9606:Homo sapiens
(human)
Length = 275
Score = 50.1 bits (25), Expect = 4e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctgg 50
||||||||||||||||||| |||||||||
Sbjct: 98 tgttgcccaggctggtctcgaactcctgg 70
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||
Sbjct: 256 tgttggccaggctggtctcaaactcctg 229
>RF00017;Metazoa_SRP;AADD01049456.1/31215-30934 9606:Homo sapiens
(human)
Length = 282
Score = 50.1 bits (25), Expect = 4e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 2 gtagagataggatctcactttgttgcccaggctggtctcaaactcctgg 50
||||||| ||| | ||||| ||||| |||| ||||||||||||||||||
Sbjct: 118 gtagagacagggtttcactgtgttggccagactggtctcaaactcctgg 70
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 5 gagataggatctcactttgttgcccaggctgg 36
|||| ||||||||||| |||||||||||||||
Sbjct: 280 gagacaggatctcactctgttgcccaggctgg 249
>RF00017;Metazoa_SRP;CABD01275057.2/3504-3778 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 275
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactc 46
|||||||||||||||||||||||||
Sbjct: 256 tgttgcccaggctggtctcaaactc 232
>RF00017;Metazoa_SRP;CABD01170698.1/7392-7117 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 276
Score = 50.1 bits (25), Expect = 4e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 4 agagataggatctcactttgttgcccaggctgg 36
||||||||| ||||||| |||||||||||||||
Sbjct: 275 agagatagggtctcactgtgttgcccaggctgg 243
>RF00017;Metazoa_SRP;CABD01199281.1/4365-4082 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 284
Score = 50.1 bits (25), Expect = 4e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 4 agagataggatctcactttgttgcccaggctgg 36
|||||| |||||||||| |||||||||||||||
Sbjct: 283 agagatgggatctcactgtgttgcccaggctgg 251
>RF00100;7SK;CABD01392425.1/354-28 9595:Gorilla gorilla gorilla
(Western lowland gorilla)
Length = 327
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactc 46
|||||||||||||||||||||||||
Sbjct: 314 tgttgcccaggctggtctcaaactc 290
>RF00017;Metazoa_SRP;AAQR01129737.1/763-1062 30611:Otolemur
garnettii (small-eared galago)
Length = 300
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 5 gagataggatctcactttgttgcccaggctgg 36
|||||||| ||||||| |||||||||||||||
Sbjct: 298 gagatagggtctcactatgttgcccaggctgg 267
>RF00017;Metazoa_SRP;ABDC01134725.1/2229-1941 30608:Microcebus
murinus (gray mouse lemur)
Length = 289
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 4 agagataggatctcactttgttgcccaggctg 35
||||| ||| ||||||||||||||||||||||
Sbjct: 288 agagacagggtctcactttgttgcccaggctg 257
>RF00017;Metazoa_SRP;ABDC01419402.1/367-644 30608:Microcebus
murinus (gray mouse lemur)
Length = 278
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
|||||||||||||||||| |||||||||
Sbjct: 98 tgttgcccaggctggtcttaaactcctg 71
>RF00017;Metazoa_SRP;ABGA01344231.1/3825-4107 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||||||||||||||||| ||||||||
Sbjct: 98 tgttgcccaggctggtctcgaactcctg 71
>RF00017;Metazoa_SRP;ABGA01028317.1/5193-4916 9601:Pongo abelii
(Sumatran orangutan)
Length = 278
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||
Sbjct: 259 tgttggccaggctggtctcaaactcctg 232
>RF00017;Metazoa_SRP;ABGA01084726.1/3367-3650 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||
Sbjct: 98 tgttggccaggctggtctcaaactcctg 71
>RF00017;Metazoa_SRP;ABGA01122455.1/6496-6777 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 5 gagataggatctcactttgttgcccaggctgg 36
|||| |||||||||||||||||||| ||||||
Sbjct: 280 gagacaggatctcactttgttgcccgggctgg 249
>RF00017;Metazoa_SRP;ABGA01352876.1/3033-3317 9601:Pongo abelii
(Sumatran orangutan)
Length = 285
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||
Sbjct: 266 tgttggccaggctggtctcaaactcctg 239
>RF00017;Metazoa_SRP;ABGA01231108.1/3579-3296 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 48.1 bits (24), Expect = 2e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 2 gtagagataggatctcactttgttgcccaggctggtctcaaactcctg 49
||||||| ||| | ||||| ||||| ||||||||||||| ||||||||
Sbjct: 118 gtagagacagggtttcactatgttggccaggctggtctcgaactcctg 71
>RF00017;Metazoa_SRP;ABGA01183034.1/26107-25804 9601:Pongo abelii
(Sumatran orangutan)
Length = 304
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||
Sbjct: 98 tgttggccaggctggtctcaaactcctg 71
>RF00017;Metazoa_SRP;ABGA01148693.1/2108-1820 9601:Pongo abelii
(Sumatran orangutan)
Length = 289
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||
Sbjct: 270 tgttggccaggctggtctcaaactcctg 243
>RF00017;Metazoa_SRP;ABGA01062811.1/1989-1705 9601:Pongo abelii
(Sumatran orangutan)
Length = 285
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||
Sbjct: 266 tgttgaccaggctggtctcaaactcctg 239
>RF00017;Metazoa_SRP;ABGA01097955.1/154-430 9601:Pongo abelii
(Sumatran orangutan)
Length = 277
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||
Sbjct: 258 tgttggccaggctggtctcaaactcctg 231
>RF00017;Metazoa_SRP;ABGA01040313.1/34253-33971 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 2 gtagagataggatctcactttgttgcccaggctggtctcaaactcctg 49
||||||| ||||| |||| ||||| ||||||||| ||||||||||||
Sbjct: 118 gtagagacaggatttcaccatgttggccaggctggcctcaaactcctg 71
>RF00017;Metazoa_SRP;ABGA01110195.1/1602-1892 9601:Pongo abelii
(Sumatran orangutan)
Length = 291
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||
Sbjct: 272 tgttgaccaggctggtctcaaactcctg 245
>RF00017;Metazoa_SRP;ABGA01295388.1/2260-2541 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||
Sbjct: 98 tgttgaccaggctggtctcaaactcctg 71
>RF00017;Metazoa_SRP;AACZ02022405.1/115343-115647 9598:Pan
troglodytes (chimpanzee)
Length = 305
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
|||||||||||||||||| |||||||||
Sbjct: 98 tgttgcccaggctggtcttaaactcctg 71
>RF00017;Metazoa_SRP;AADA01154913.1/2126-1844 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 6 agataggatctcactttgttgcccaggctggtctcaaactcctg 49
|||| |||| ||||| ||||| ||||||||||| ||||||||||
Sbjct: 114 agatgggatttcactatgttggccaggctggtcacaaactcctg 71
>RF00017;Metazoa_SRP;AACZ02134052.1/6279-6003 9598:Pan troglodytes
(chimpanzee)
Length = 277
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||
Sbjct: 258 tgttggccaggctggtctcaaactcctg 231
>RF00017;Metazoa_SRP;AADA01234693.1/3123-2825 9598:Pan troglodytes
(chimpanzee)
Length = 299
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||
Sbjct: 98 tgttggccaggctggtctcaaactcctg 71
>RF00017;Metazoa_SRP;AADA01339504.1/248-529 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||
Sbjct: 98 tgttgaccaggctggtctcaaactcctg 71
>RF00017;Metazoa_SRP;AADA01298945.1/4281-4568 9598:Pan troglodytes
(chimpanzee)
Length = 288
Score = 48.1 bits (24), Expect = 2e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 2 gtagagataggatctcactttgttgcccaggctggtctcaaactcctg 49
|||||||| || | ||||| ||||| ||||||||||||| ||||||||
Sbjct: 118 gtagagatggggtttcactatgttggccaggctggtctcgaactcctg 71
>RF00017;Metazoa_SRP;AC226497.2/27105-26802 9606:Homo sapiens
(human)
Length = 304
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||
Sbjct: 98 tgttgaccaggctggtctcaaactcctg 71
>RF00017;Metazoa_SRP;AADD01109841.1/1684-1407 9606:Homo sapiens
(human)
Length = 278
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||
Sbjct: 259 tgttggccaggctggtctcaaactcctg 232
>RF00017;Metazoa_SRP;AC073138.3/68431-68158 9606:Homo sapiens
(human)
Length = 274
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 19 ctttgttgcccaggctggtctcaaactcctgg 50
||||||||||||||||||||| |||||||||
Sbjct: 7 ctttgttgcccaggctggtcttgaactcctgg 38
>RF00017;Metazoa_SRP;ABSL01002126.1/64865-64580 9606:Homo sapiens
(human)
Length = 286
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||
Sbjct: 267 tgttgaccaggctggtctcaaactcctg 240
>RF00017;Metazoa_SRP;ABSL01070390.1/4542-4844 9606:Homo sapiens
(human)
Length = 303
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||
Sbjct: 98 tgttgaccaggctggtctcaaactcctg 71
>RF00017;Metazoa_SRP;AADC01003362.1/5618-5894 9606:Homo sapiens
(human)
Length = 277
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||
Sbjct: 258 tgttgtccaggctggtctcaaactcctg 231
>RF00017;Metazoa_SRP;ABBA01031768.1/44728-45012 9606:Homo sapiens
(human)
Length = 285
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||
Sbjct: 98 tgttggccaggctggtctcaaactcctg 71
>RF00017;Metazoa_SRP;ABBA01008412.1/14888-14606 9606:Homo sapiens
(human)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||||||||||||||||| ||||||||
Sbjct: 98 tgttgcccaggctggtctcgaactcctg 71
>RF00017;Metazoa_SRP;AC011443.6/127389-127670 9606:Homo sapiens
(human)
Length = 282
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||||||||||||||||| ||||||||
Sbjct: 263 tgttgcccaggctggtctccaactcctg 236
>RF00017;Metazoa_SRP;ABSL01223068.1/830-1139 9606:Homo sapiens
(human)
Length = 310
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||||||||||||||||| ||||||||
Sbjct: 291 tgttgcccaggctggtctcgaactcctg 264
>RF00017;Metazoa_SRP;AADC01000800.1/48466-48753 9606:Homo sapiens
(human)
Length = 288
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||
Sbjct: 269 tgttgaccaggctggtctcaaactcctg 242
>RF00017;Metazoa_SRP;CABD01540115.2/13-309 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 297
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||
Sbjct: 98 tgttggccaggctggtctcaaactcctg 71
>RF00017;Metazoa_SRP;CABD01196201.1/2840-3149 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 310
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||||||||||||||||| ||||||||
Sbjct: 291 tgttgcccaggctggtctcgaactcctg 264
>RF00017;Metazoa_SRP;CABD01017919.1/5480-5762 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||||||||||||||||| ||||||||
Sbjct: 98 tgttgcccaggctggtctcgaactcctg 71
>RF00017;Metazoa_SRP;AANU01114749.1/1930-1640 9544:Macaca mulatta
(rhesus monkey)
Length = 291
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggct 34
|||||||||| ||||||| |||||||||||||
Sbjct: 291 tagagatagggtctcactatgttgcccaggct 260
>RF00017;Metazoa_SRP;AANU01272978.1/4107-3825 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||| ||||||||||||||||||||||
Sbjct: 264 tgttgaccaggctggtctcaaactcctg 237
>RF00017;Metazoa_SRP;AANU01121949.1/21470-21170 9544:Macaca mulatta
(rhesus monkey)
Length = 301
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 52 ctgggcaacaaagtgagaccttatctct 79
|||||||||||||||||||||| |||||
Sbjct: 273 ctgggcaacaaagtgagaccttgtctct 300
>RF00017;Metazoa_SRP;AANU01209541.1/6074-5793 9544:Macaca mulatta
(rhesus monkey)
Length = 282
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcctg 49
||||||||||| ||||||||||||||||
Sbjct: 98 tgttgcccagggtggtctcaaactcctg 71
>RF00017;Metazoa_SRP;AANU01164881.1/773-1041 9544:Macaca mulatta
(rhesus monkey)
Length = 269
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 5 gagataggatctcactttgttgcccaggctgg 36
||||| |||||||||| |||||||||||||||
Sbjct: 269 gagatgggatctcactatgttgcccaggctgg 238
>RF00017;Metazoa_SRP;ABRP01299205.1/1580-1868 132908:Pteropus
vampyrus (large flying fox)
Length = 289
Score = 46.1 bits (23), Expect = 7e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggc 33
|||||| ||||||||||| ||||||||||||
Sbjct: 241 tagagacaggatctcactatgttgcccaggc 211
>RF00017;Metazoa_SRP;ABGA01310580.1/20280-19991 9601:Pongo abelii
(Sumatran orangutan)
Length = 290
Score = 46.1 bits (23), Expect = 7e-05
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctggtctcaaactcctg 49
|||||| ||| | ||||| ||||| ||||||||||||| ||||||||
Sbjct: 290 tagagacagggtttcactatgttggccaggctggtctcgaactcctg 244
>RF00017;Metazoa_SRP;ABGA01013480.1/3405-3125 9601:Pongo abelii
(Sumatran orangutan)
Length = 281
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 10 aggatctcactttgttgcccaggctgg 36
||||||||||| |||||||||||||||
Sbjct: 141 aggatctcactctgttgcccaggctgg 115
>RF00017;Metazoa_SRP;ABGA01141136.1/2459-2170 9601:Pongo abelii
(Sumatran orangutan)
Length = 290
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 14 tctcactttgttgcccaggctggtctcaaactcct 48
||||||| ||||| |||||||||||| ||||||||
Sbjct: 278 tctcactctgttgtccaggctggtctaaaactcct 244
>RF00017;Metazoa_SRP;AACZ02075603.1/13997-14269 9598:Pan
troglodytes (chimpanzee)
Length = 273
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 28 ccaggctggtctcaaactcctgg 50
|||||||||||||||||||||||
Sbjct: 92 ccaggctggtctcaaactcctgg 70
>RF00017;Metazoa_SRP;AADC01137575.1/14194-14472 9606:Homo sapiens
(human)
Length = 279
Score = 46.1 bits (23), Expect = 7e-05
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctggtctcaaactcctg 49
|||||| ||| | ||||| ||||| ||||||||||||| ||||||||
Sbjct: 279 tagagacagggtttcactatgttggccaggctggtctcgaactcctg 233
>RF00017;Metazoa_SRP;AADC01132091.1/2625-2347 9606:Homo sapiens
(human)
Length = 279
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcct 48
||||| |||||||||||||||||||||
Sbjct: 260 tgttggccaggctggtctcaaactcct 234
>RF00017;Metazoa_SRP;CABD01081734.1/6948-7235 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 288
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcct 48
||||| |||||||||||||||||||||
Sbjct: 269 tgttggccaggctggtctcaaactcct 243
>RF00017;Metazoa_SRP;AANU01108416.1/2969-2672 9544:Macaca mulatta
(rhesus monkey)
Length = 298
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 10 aggatctcactttgttgcccaggctgg 36
||||||||||| |||||||||||||||
Sbjct: 291 aggatctcactatgttgcccaggctgg 265
>RF00017;Metazoa_SRP;AANU01141472.1/979-694 9544:Macaca mulatta
(rhesus monkey)
Length = 286
Score = 46.1 bits (23), Expect = 7e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1 tgtagagataggatctcactttgttgcccaggctggtct 39
||||||||| || |||| ||||||||||||||||||||
Sbjct: 2 tgtagagatggggtctcgttttgttgcccaggctggtct 40
>RF00017;Metazoa_SRP;ABRN01391521.1/6147-6445 9739:Tursiops
truncatus (bottlenosed dolphin)
Length = 299
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 ggatctcactttgttgcccaggctgg 36
|||||||||| |||||||||||||||
Sbjct: 291 ggatctcactatgttgcccaggctgg 266
>RF00017;Metazoa_SRP;AAQR01278779.1/3525-3823 30611:Otolemur
garnettii (small-eared galago)
Length = 299
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctgg 36
||||||| || ||||||| |||||||||||||||
Sbjct: 299 tagagatggggtctcactatgttgcccaggctgg 266
>RF00017;Metazoa_SRP;AAQR01565015.1/1102-1400 30611:Otolemur
garnettii (small-eared galago)
Length = 299
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctgg 36
|||||| ||| ||||||| |||||||||||||||
Sbjct: 299 tagagacagggtctcactatgttgcccaggctgg 266
>RF00017;Metazoa_SRP;AAQR01650235.1/10324-10032 30611:Otolemur
garnettii (small-eared galago)
Length = 293
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctgg 36
|||||| ||| ||||||| |||||||||||||||
Sbjct: 293 tagagacagggtctcactatgttgcccaggctgg 260
>RF00017;Metazoa_SRP;AAQR01520056.1/3686-3390 30611:Otolemur
garnettii (small-eared galago)
Length = 297
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctgg 36
||||||| || ||||||| |||||||||||||||
Sbjct: 297 tagagatggggtctcactatgttgcccaggctgg 264
>RF00017;Metazoa_SRP;AAQR01031381.1/2112-2407 30611:Otolemur
garnettii (small-eared galago)
Length = 296
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctgg 36
||||||| || ||||||| |||||||||||||||
Sbjct: 296 tagagatggggtctcactgtgttgcccaggctgg 263
>RF00017;Metazoa_SRP;AAQR01654455.1/1999-2278 30611:Otolemur
garnettii (small-eared galago)
Length = 280
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctgg 36
||||||| || ||||||| |||||||||||||||
Sbjct: 280 tagagatggggtctcactatgttgcccaggctgg 247
>RF00017;Metazoa_SRP;AAQR01289199.1/5095-4779 30611:Otolemur
garnettii (small-eared galago)
Length = 317
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 ggatctcactttgttgcccaggctgg 36
|||||||||| |||||||||||||||
Sbjct: 309 ggatctcactatgttgcccaggctgg 284
>RF00017;Metazoa_SRP;AAQR01113568.1/4415-4116 30611:Otolemur
garnettii (small-eared galago)
Length = 300
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctgg 36
||||||| || ||||||| |||||||||||||||
Sbjct: 300 tagagatggggtctcactatgttgcccaggctgg 267
>RF00017;Metazoa_SRP;AAQR01443952.1/1287-985 30611:Otolemur
garnettii (small-eared galago)
Length = 303
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 50 gtctgggcaacaaagtgagaccttatctct 79
|||||||||||| ||||||||||| |||||
Sbjct: 273 gtctgggcaacatagtgagaccttgtctct 302
>RF00017;Metazoa_SRP;AAQR01684900.1/61-335 30611:Otolemur garnettii
(small-eared galago)
Length = 275
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctgg 36
||||||| || ||||||| |||||||||||||||
Sbjct: 275 tagagatggggtctcactatgttgcccaggctgg 242
>RF00017;Metazoa_SRP;ABDC01307296.1/577-861 30608:Microcebus murinus
(gray mouse lemur)
Length = 285
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctgg 36
|||||| ||| ||||||| |||||||||||||||
Sbjct: 285 tagagacagggtctcactctgttgcccaggctgg 252
>RF00017;Metazoa_SRP;ABDC01430615.1/6-234 30608:Microcebus murinus
(gray mouse lemur)
Length = 229
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 4 agagataggatctcactttgttgcccaggc 33
||||| ||||||||||| ||||||||||||
Sbjct: 228 agagacaggatctcactatgttgcccaggc 199
>RF00017;Metazoa_SRP;ABDC01474612.1/2158-1874 30608:Microcebus
murinus (gray mouse lemur)
Length = 285
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 24 ttgcccaggctggtctcaaactcctg 49
|||| |||||||||||||||||||||
Sbjct: 266 ttgctcaggctggtctcaaactcctg 241
>RF00017;Metazoa_SRP;ABDC01018955.1/759-1037 30608:Microcebus
murinus (gray mouse lemur)
Length = 279
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 5 gagataggatctcactttgttgcccaggct 34
|||| ||| |||||||||||||||||||||
Sbjct: 150 gagacagggtctcactttgttgcccaggct 121
>RF00017;Metazoa_SRP;ABGA01093781.1/18416-18133 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcc 47
||||| ||||||||||||||||||||
Sbjct: 98 tgttggccaggctggtctcaaactcc 73
>RF00017;Metazoa_SRP;ABGA01223043.1/6951-6695 9601:Pongo abelii
(Sumatran orangutan)
Length = 257
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctgg 36
||||||| || ||||||| |||||||||||||||
Sbjct: 257 tagagatggggtctcactatgttgcccaggctgg 224
>RF00017;Metazoa_SRP;ABGA01130602.1/4125-3849 9601:Pongo abelii
(Sumatran orangutan)
Length = 277
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctgg 36
|||||| ||| ||||||| |||||||||||||||
Sbjct: 277 tagagacagggtctcactatgttgcccaggctgg 244
>RF00017;Metazoa_SRP;ABGA01365159.1/7275-7557 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 16 tcactttgttgcccaggctggtctcaaactcctg 49
||||| ||||| ||||||||||||| ||||||||
Sbjct: 104 tcactatgttggccaggctggtctcgaactcctg 71
>RF00017;Metazoa_SRP;AACZ02154509.1/5623-5904 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 16 tcactttgttgcccaggctggtctcaaactcctg 49
||||| ||||| |||| |||||||||||||||||
Sbjct: 104 tcactatgttggccagtctggtctcaaactcctg 71
>RF00017;Metazoa_SRP;AJ250235.1/9403-9133 9606:Homo sapiens (human)
Length = 271
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 28 ccaggctggtctcaaactcctg 49
||||||||||||||||||||||
Sbjct: 246 ccaggctggtctcaaactcctg 225
>RF00017;Metazoa_SRP;AC003684.1/209339-209700 9606:Homo sapiens
(human)
Length = 362
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctgg 36
||||||| || ||||||| |||||||||||||||
Sbjct: 362 tagagatcgggtctcactatgttgcccaggctgg 329
>RF00017;Metazoa_SRP;ABBA01020058.1/2903-3187 9606:Homo sapiens
(human)
Length = 285
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcc 47
||||| ||||||||||||||||||||
Sbjct: 266 tgttggccaggctggtctcaaactcc 241
>RF00017;Metazoa_SRP;AADC01144185.1/1515-1226 9606:Homo sapiens
(human)
Length = 290
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctgg 36
||||||| || ||||||| |||||||||||||||
Sbjct: 290 tagagatcgggtctcactatgttgcccaggctgg 257
>RF00017;Metazoa_SRP;AADC01147155.1/334-617 9606:Homo sapiens
(human)
Length = 284
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 16 tcactttgttgcccaggctggtctcaaactcctg 49
||||| ||||| ||||||||||||| ||||||||
Sbjct: 104 tcactatgttggccaggctggtctcgaactcctg 71
>RF00017;Metazoa_SRP;AADC01108767.1/39879-40163 9606:Homo sapiens
(human)
Length = 285
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 aggatctcactttgttgcccaggctg 35
||||||||||| ||||||||||||||
Sbjct: 277 aggatctcactatgttgcccaggctg 252
>RF00017;Metazoa_SRP;Z83844.5/43689-43413 9606:Homo sapiens (human)
Length = 277
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctgg 36
|||||| ||| ||||||| |||||||||||||||
Sbjct: 277 tagagacagggtctcactatgttgcccaggctgg 244
>RF00017;Metazoa_SRP;AADD01142743.1/2651-2932 9606:Homo sapiens
(human)
Length = 282
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 16 tcactttgttgcccaggctggtctcaaactcctg 49
||||| ||||| |||| |||||||||||||||||
Sbjct: 104 tcactatgttggccagtctggtctcaaactcctg 71
>RF00017;Metazoa_SRP;CABD01021803.1/1465-1747 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 283
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 16 tcactttgttgcccaggctggtctcaaactcctg 49
||||| ||||| ||||||||||||| ||||||||
Sbjct: 104 tcactatgttggccaggctggtctcgaactcctg 71
>RF00017;Metazoa_SRP;CABD01247777.1/818-531 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 288
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 28 ccaggctggtctcaaactcctg 49
||||||||||||||||||||||
Sbjct: 263 ccaggctggtctcaaactcctg 242
>RF00017;Metazoa_SRP;AANU01094464.1/8633-8932 9544:Macaca mulatta
(rhesus monkey)
Length = 300
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctgg 36
|||||| ||| ||||||| |||||||||||||||
Sbjct: 300 tagagacagggtctcactctgttgcccaggctgg 267
>RF00017;Metazoa_SRP;AANU01180380.1/9175-9458 9544:Macaca mulatta
(rhesus monkey)
Length = 284
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 16 tcactttgttgcccaggctggtctcaaactcctg 49
||||| ||||| ||||||||||||| ||||||||
Sbjct: 271 tcactatgttggccaggctggtctcgaactcctg 238
>RF00017;Metazoa_SRP;AANU01259311.1/23486-23784 9544:Macaca mulatta
(rhesus monkey)
Length = 299
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctgg 36
|||||| ||| ||||||| |||||||||||||||
Sbjct: 299 tagagacagggtctcactctgttgcccaggctgg 266
>RF00017;Metazoa_SRP;AANU01127450.1/51334-51638 9544:Macaca mulatta
(rhesus monkey)
Length = 305
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 ggatctcactttgttgcccaggctgg 36
|||||||||| |||||||||||||||
Sbjct: 297 ggatctcactatgttgcccaggctgg 272
>RF00017;Metazoa_SRP;AANU01257020.1/588-887 9544:Macaca mulatta
(rhesus monkey)
Length = 300
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 tagagataggatctcactttgttgcccaggctgg 36
|||||| ||| ||||||| |||||||||||||||
Sbjct: 300 tagagacagggtctcactatgttgcccaggctgg 267
>RF00017;Metazoa_SRP;AANU01177508.1/8614-8332 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcc 47
||||| ||||||||||||||||||||
Sbjct: 264 tgttggccaggctggtctcaaactcc 239
>RF00017;Metazoa_SRP;AAHY01772147.1/228-510 10090:Mus musculus
(house mouse)
Length = 283
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 28 ccaggctggtctcaaactcctg 49
||||||||||||||||||||||
Sbjct: 92 ccaggctggtctcaaactcctg 71
>RF00100;7SK;AANU01297328.1/4981-4646 9544:Macaca mulatta (rhesus
monkey)
Length = 336
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 tgttgcccaggctggtctcaaactcc 47
||||| ||||||||||||||||||||
Sbjct: 26 tgttggccaggctggtctcaaactcc 1
