miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>29154_hsa-mir-1296:mirbase
Length = 92
Score = 180 bits (91), Expect = 1e-46
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 1 acctacctaactgggttagggccctggctccatctcctttaggaaaaccttctgtgggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acctacctaactgggttagggccctggctccatctcctttaggaaaaccttctgtgggga 60
Query: 61 gtggggcttcgaccctaacccaggtgggctg 91
|||||||||||||||||||||||||||||||
Sbjct: 61 gtggggcttcgaccctaacccaggtgggctg 91
>31351_ppy-mir-1296:mirbase
Length = 92
Score = 180 bits (91), Expect = 1e-46
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 1 acctacctaactgggttagggccctggctccatctcctttaggaaaaccttctgtgggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acctacctaactgggttagggccctggctccatctcctttaggaaaaccttctgtgggga 60
Query: 61 gtggggcttcgaccctaacccaggtgggctg 91
|||||||||||||||||||||||||||||||
Sbjct: 61 gtggggcttcgaccctaacccaggtgggctg 91
>27297_eca-mir-1296:mirbase
Length = 92
Score = 165 bits (83), Expect = 7e-42
Identities = 89/91 (97%)
Strand = Plus / Plus
Query: 1 acctacctaactgggttagggccctggctccatctcctttaggaaaaccttctgtgggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 acctacctaactgggttagggccctggctccatctcctttaggaaaaccttctttgggga 60
Query: 61 gtggggcttcgaccctaacccaggtgggctg 91
||||||||||||||||||||||| |||||||
Sbjct: 61 gtggggcttcgaccctaacccagctgggctg 91
>33484_bta-mir-1296:mirbase
Length = 91
Score = 155 bits (78), Expect = 6e-39
Identities = 87/90 (96%)
Strand = Plus / Plus
Query: 2 cctacctaactgggttagggccctggctccatctcctttaggaaaaccttctgtggggag 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctacctaactgggttagggccctggctccatctcctttaggaaaaccttctgtggggag 60
Query: 62 tggggcttcgaccctaacccaggtgggctg 91
|||||||| |||||||||| || |||||||
Sbjct: 61 tggggctttgaccctaacctagctgggctg 90
>34144_ssc-mir-1296:mirbase
Length = 85
Score = 145 bits (73), Expect = 6e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 6 cctaactgggttagggccctggctccatctcctttaggaaaaccttctgtggggagtggg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctaactgggttagggccctggctccatctcctttaggaaaaccttctgtggggagtggg 60
Query: 66 gcttcgaccctaacccaggtgggct 90
| || ||||||||||||| ||||||
Sbjct: 61 gttttgaccctaacccagctgggct 85
