miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00951;mir-1302;CABD01607770.2/408-357 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 52
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 56 catgcagtatttgggacatacttatgctaaaa 87
||||||||||||||||||||||||| ||||||
Sbjct: 21 catgcagtatttgggacatacttatactaaaa 52
>RF00951;mir-1302;ABRN01375792.1/2900-2951 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 52
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 63 tatttgggacatacttatgctaaaa 87
|||||||||||||||||||||||||
Sbjct: 28 tatttgggacatacttatgctaaaa 52
>RF00951;mir-1302;ABDC01203092.1/8237-8186 30608:Microcebus
murinus (gray mouse lemur)
Length = 52
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 63 tatttgggacatacttatgctaaaa 87
|||||||||||||||||||||||||
Sbjct: 28 tatttgggacatacttatgctaaaa 52
>RF00951;mir-1302;ABVD01188517.1/7377-7428 9358:Choloepus
hoffmanni (Hoffmann's two-fingered sloth)
Length = 52
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 56 catgcagtatttgggacatacttatgctaaaa 87
|||||| |||||||||||||||||| ||||||
Sbjct: 21 catgcaatatttgggacatacttatactaaaa 52
>RF00951;mir-1302;ABRQ01257097.1/9096-9147 9813:Procavia capensis
(cape rock hyrax)
Length = 52
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 56 catgcagtatttgggacatacttatgctaaaa 87
|||||| |||||||||||||||||| ||||||
Sbjct: 21 catgcaatatttgggacatacttatactaaaa 52
>RF00951;mir-1302;AAWR02002278.1/2146-2197 9796:Equus caballus
(horse)
Length = 52
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 56 catgcagtatttgggacatacttatgctaaa 86
|||||| |||||||||||||||||| |||||
Sbjct: 21 catgcaatatttgggacatacttatactaaa 51
>RF00951;mir-1302;ABBA01055362.1/41683-41734 9606:Homo sapiens
(human)
Length = 52
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 67 tgggacatacttatgctaaaaa 88
||||||||||||||||||||||
Sbjct: 22 tgggacatacttatgctaaaaa 1
